RNA–Protein interactions for RNA: ENST00000533898.5

RCN1-211, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-211ENST00000533898 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
RCN1-211ENST00000533898 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
RCN1-211ENST00000533898 KRTAP10-10P60014 251 aa1.91□□□□□ -2.1
RCN1-211ENST00000533898 KRTAP10-7P60409 375 aaPredicted RBP1.91□□□□□ -2.1
RCN1-211ENST00000533898 SYNE2Q8WXH0 6885 aaKnown RBP1.91□□□□□ -2.1
RCN1-211ENST00000533898 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
RCN1-211ENST00000533898 S4R3F8 94 aa1.87□□□□□ -2.11
RCN1-211ENST00000533898 NEBP20929 6669 aa1.86□□□□□ -2.11
RCN1-211ENST00000533898 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
RCN1-211ENST00000533898 KMT2DO14686 5537 aa1.86□□□□□ -2.11
RCN1-211ENST00000533898 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.11
RCN1-211ENST00000533898 M0QZ58 72 aa1.83□□□□□ -2.12
RCN1-211ENST00000533898 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
RCN1-211ENST00000533898 PLAC4Q8WY50 150 aa1.83□□□□□ -2.12
RCN1-211ENST00000533898 MT1BP07438 61 aa1.82□□□□□ -2.12
RCN1-211ENST00000533898 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
RCN1-211ENST00000533898 A0A0D9SG42 100 aa1.81□□□□□ -2.12
RCN1-211ENST00000533898 C10orf95Q9H7T3 257 aa1.81□□□□□ -2.12
RCN1-211ENST00000533898 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP12-2P59991 146 aa1.79□□□□□ -2.12
RCN1-211ENST00000533898 SPRR2GQ9BYE4 73 aa1.79□□□□□ -2.12
RCN1-211ENST00000533898 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
RCN1-211ENST00000533898 MDN1Q9NU22 5596 aa1.79□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP19-6Q3LI70 58 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP19-8Q3LI54 63 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 LCE3DQ9BYE3 92 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP4-3Q9BYR4 195 aa1.78□□□□□ -2.12
RCN1-211ENST00000533898 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
RCN1-211ENST00000533898 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
RCN1-211ENST00000533898 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
RCN1-211ENST00000533898 INE1O15225 51 aa1.73□□□□□ -2.13
RCN1-211ENST00000533898 KRTAP10-5P60370 271 aa1.73□□□□□ -2.13
RCN1-211ENST00000533898 MT1XP80297 61 aa1.72□□□□□ -2.13
RCN1-211ENST00000533898 AHNAKQ09666 5890 aaKnown RBP1.72□□□□□ -2.13
RCN1-211ENST00000533898 SPRR5A0A1B0GTR4 108 aa1.72□□□□□ -2.13
RCN1-211ENST00000533898 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
RCN1-211ENST00000533898 KRTAP2-1Q9BYU5 128 aa1.67□□□□□ -2.14
RCN1-211ENST00000533898 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.15
RCN1-211ENST00000533898 TNP1P09430 55 aa1.63□□□□□ -2.15
RCN1-211ENST00000533898 DSTQ03001 7570 aaKnown RBP1.62□□□□□ -2.15
RCN1-211ENST00000533898 SPRR2FQ96RM1 72 aa1.6□□□□□ -2.15
RCN1-211ENST00000533898 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
RCN1-211ENST00000533898 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
RCN1-211ENST00000533898 SPRR2EP22531 72 aa1.55□□□□□ -2.16
RCN1-211ENST00000533898 SPRR2BP35325 72 aa1.55□□□□□ -2.16
RCN1-211ENST00000533898 SPRR2AP35326 72 aa1.55□□□□□ -2.16
RCN1-211ENST00000533898 KRTAP19-7Q3SYF9 63 aa1.55□□□□□ -2.16
RCN1-211ENST00000533898 KRTAP19-5Q3LI72 72 aa1.51□□□□□ -2.17
RCN1-211ENST00000533898 LCE3AQ5TA76 89 aa1.51□□□□□ -2.17
RCN1-211ENST00000533898 KRTAP9-6A8MVA2 160 aa1.5□□□□□ -2.17
RCN1-211ENST00000533898 MT1EP04732 61 aa1.5□□□□□ -2.17
RCN1-211ENST00000533898 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
RCN1-211ENST00000533898 SPRR2DP22532 72 aa1.48□□□□□ -2.17
RCN1-211ENST00000533898 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
RCN1-211ENST00000533898 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
RCN1-211ENST00000533898 MT1LQ93083 61 aa1.45□□□□□ -2.18
RCN1-211ENST00000533898 MT1MQ8N339 61 aa1.43□□□□□ -2.18
RCN1-211ENST00000533898 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
RCN1-211ENST00000533898 MT1GP13640 62 aa1.39□□□□□ -2.19
RCN1-211ENST00000533898 OBSCNQ5VST9 7968 aa1.39□□□□□ -2.19
RCN1-211ENST00000533898 KRTAP12-4P60329 112 aa1.38□□□□□ -2.19
RCN1-211ENST00000533898 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
RCN1-211ENST00000533898 MT4P47944 62 aa1.34□□□□□ -2.2
RCN1-211ENST00000533898 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
RCN1-211ENST00000533898 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
RCN1-211ENST00000533898 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
RCN1-211ENST00000533898 MT1AP04731 61 aa1.2□□□□□ -2.22
RCN1-211ENST00000533898 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
RCN1-211ENST00000533898 LCE1CQ5T751 118 aa1.14□□□□□ -2.23
RCN1-211ENST00000533898 LCE1BQ5T7P3 118 aa1.14□□□□□ -2.23
RCN1-211ENST00000533898 PRM1P04553 51 aa1.04□□□□□ -2.24
RCN1-211ENST00000533898 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
RCN1-211ENST00000533898 KRTAP21-2Q3LI59 83 aa0.81□□□□□ -2.28
RCN1-211ENST00000533898 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
RCN1-211ENST00000533898 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 70.8 ms