RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
AMBRA1-211ENST00000533727 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
AMBRA1-211ENST00000533727 MT1MQ8N339 61 aa3.66□□□□□ -1.82
AMBRA1-211ENST00000533727 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.82
AMBRA1-211ENST00000533727 KRTAP9-7A8MTY7 169 aa3.65□□□□□ -1.83
AMBRA1-211ENST00000533727 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
AMBRA1-211ENST00000533727 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
AMBRA1-211ENST00000533727 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
AMBRA1-211ENST00000533727 HMCN2Q8NDA2 5059 aa3.61□□□□□ -1.83
AMBRA1-211ENST00000533727 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
AMBRA1-211ENST00000533727 MT3P25713 68 aa3.56□□□□□ -1.84
AMBRA1-211ENST00000533727 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
AMBRA1-211ENST00000533727 SYNE1Q8NF91 8797 aaKnown RBP3.53□□□□□ -1.84
AMBRA1-211ENST00000533727 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.85
AMBRA1-211ENST00000533727 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.85
AMBRA1-211ENST00000533727 MT4P47944 62 aa3.52□□□□□ -1.85
AMBRA1-211ENST00000533727 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
AMBRA1-211ENST00000533727 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
AMBRA1-211ENST00000533727 MUC2Q02817 5179 aa3.48□□□□□ -1.85
AMBRA1-211ENST00000533727 MT1AP04731 61 aa3.42□□□□□ -1.86
AMBRA1-211ENST00000533727 PRM1P04553 51 aa3.41□□□□□ -1.86
AMBRA1-211ENST00000533727 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
AMBRA1-211ENST00000533727 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
AMBRA1-211ENST00000533727 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
AMBRA1-211ENST00000533727 KRTAP4-3Q9BYR4 195 aa3.33□□□□□ -1.88
AMBRA1-211ENST00000533727 LCE5AQ5TCM9 118 aa3.31□□□□□ -1.88
AMBRA1-211ENST00000533727 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
AMBRA1-211ENST00000533727 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
AMBRA1-211ENST00000533727 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
AMBRA1-211ENST00000533727 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
AMBRA1-211ENST00000533727 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
AMBRA1-211ENST00000533727 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
AMBRA1-211ENST00000533727 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
AMBRA1-211ENST00000533727 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
AMBRA1-211ENST00000533727 USH2AO75445 5202 aa3.09□□□□□ -1.92
AMBRA1-211ENST00000533727 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
AMBRA1-211ENST00000533727 KRTAP6-2Q3LI66 62 aa3.06□□□□□ -1.92
AMBRA1-211ENST00000533727 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
AMBRA1-211ENST00000533727 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
AMBRA1-211ENST00000533727 NEBP20929 6669 aa2.99□□□□□ -1.93
AMBRA1-211ENST00000533727 KMT2DO14686 5537 aa2.98□□□□□ -1.93
AMBRA1-211ENST00000533727 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
AMBRA1-211ENST00000533727 FCGBPQ9Y6R7 5405 aaPredicted RBP2.9□□□□□ -1.94
AMBRA1-211ENST00000533727 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
AMBRA1-211ENST00000533727 MACF1Q9UPN3 7388 aaKnown RBP2.85□□□□□ -1.95
AMBRA1-211ENST00000533727 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
AMBRA1-211ENST00000533727 KRTAP20-2Q3LI61 65 aa2.77□□□□□ -1.97
AMBRA1-211ENST00000533727 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
AMBRA1-211ENST00000533727 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
AMBRA1-211ENST00000533727 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
AMBRA1-211ENST00000533727 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
AMBRA1-211ENST00000533727 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
AMBRA1-211ENST00000533727 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
AMBRA1-211ENST00000533727 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
AMBRA1-211ENST00000533727 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
AMBRA1-211ENST00000533727 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
AMBRA1-211ENST00000533727 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
AMBRA1-211ENST00000533727 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
AMBRA1-211ENST00000533727 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
AMBRA1-211ENST00000533727 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
AMBRA1-211ENST00000533727 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
AMBRA1-211ENST00000533727 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
AMBRA1-211ENST00000533727 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
AMBRA1-211ENST00000533727 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
AMBRA1-211ENST00000533727 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
AMBRA1-211ENST00000533727 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
AMBRA1-211ENST00000533727 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
AMBRA1-211ENST00000533727 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
AMBRA1-211ENST00000533727 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
AMBRA1-211ENST00000533727 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
AMBRA1-211ENST00000533727 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
AMBRA1-211ENST00000533727 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
AMBRA1-211ENST00000533727 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
AMBRA1-211ENST00000533727 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.13
AMBRA1-211ENST00000533727 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
AMBRA1-211ENST00000533727 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
AMBRA1-211ENST00000533727 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 109.8 ms