RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
CTSB-228ENST00000533455 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
CTSB-228ENST00000533455 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
CTSB-228ENST00000533455 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.55
CTSB-228ENST00000533455 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
CTSB-228ENST00000533455 KRTAP4-3Q9BYR4 195 aa5.33□□□□□ -1.56
CTSB-228ENST00000533455 MT1MQ8N339 61 aa5.31□□□□□ -1.56
CTSB-228ENST00000533455 MT1GP13640 62 aa5.3□□□□□ -1.56
CTSB-228ENST00000533455 MACF1Q9UPN3 7388 aaKnown RBP5.29□□□□□ -1.56
CTSB-228ENST00000533455 KRTAP19-3Q7Z4W3 81 aa5.29□□□□□ -1.56
CTSB-228ENST00000533455 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
CTSB-228ENST00000533455 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
CTSB-228ENST00000533455 SYNE2Q8WXH0 6885 aaKnown RBP5.18□□□□□ -1.58
CTSB-228ENST00000533455 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
CTSB-228ENST00000533455 LCE5AQ5TCM9 118 aa5.09□□□□□ -1.59
CTSB-228ENST00000533455 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.6
CTSB-228ENST00000533455 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
CTSB-228ENST00000533455 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
CTSB-228ENST00000533455 MT1AP04731 61 aa4.92□□□□□ -1.62
CTSB-228ENST00000533455 KRTAP5-9P26371 169 aa4.89□□□□□ -1.63
CTSB-228ENST00000533455 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.87□□□□□ -1.63
CTSB-228ENST00000533455 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
CTSB-228ENST00000533455 KRTAP9-7A8MTY7 169 aa4.84□□□□□ -1.63
CTSB-228ENST00000533455 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.64
CTSB-228ENST00000533455 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
CTSB-228ENST00000533455 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
CTSB-228ENST00000533455 SPRR2EP22531 72 aa4.77□□□□□ -1.65
CTSB-228ENST00000533455 SPRR2BP35325 72 aa4.77□□□□□ -1.65
CTSB-228ENST00000533455 SPRR2AP35326 72 aa4.77□□□□□ -1.65
CTSB-228ENST00000533455 SYNE1Q8NF91 8797 aaKnown RBP4.74□□□□□ -1.65
CTSB-228ENST00000533455 LCE3DQ9BYE3 92 aa4.73□□□□□ -1.65
CTSB-228ENST00000533455 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
CTSB-228ENST00000533455 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
CTSB-228ENST00000533455 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
CTSB-228ENST00000533455 SPRR2DP22532 72 aa4.58□□□□□ -1.68
CTSB-228ENST00000533455 PRM1P04553 51 aa4.54□□□□□ -1.68
CTSB-228ENST00000533455 NEBP20929 6669 aa4.52□□□□□ -1.69
CTSB-228ENST00000533455 KRTAP9-4Q9BYQ2 154 aa4.51□□□□□ -1.69
CTSB-228ENST00000533455 KRTAP6-2Q3LI66 62 aa4.39□□□□□ -1.71
CTSB-228ENST00000533455 MT3P25713 68 aa4.31□□□□□ -1.72
CTSB-228ENST00000533455 KRTAP20-1Q3LI63 56 aa4.26□□□□□ -1.73
CTSB-228ENST00000533455 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
CTSB-228ENST00000533455 MT4P47944 62 aa4.04□□□□□ -1.76
CTSB-228ENST00000533455 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
CTSB-228ENST00000533455 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
CTSB-228ENST00000533455 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
CTSB-228ENST00000533455 HMCN1Q96RW7 5635 aa3.97□□□□□ -1.77
CTSB-228ENST00000533455 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
CTSB-228ENST00000533455 LCE1DQ5T752 114 aa3.9□□□□□ -1.78
CTSB-228ENST00000533455 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
CTSB-228ENST00000533455 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
CTSB-228ENST00000533455 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
CTSB-228ENST00000533455 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
CTSB-228ENST00000533455 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
CTSB-228ENST00000533455 GPR98Q8WXG9 6306 aa3.62□□□□□ -1.83
CTSB-228ENST00000533455 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
CTSB-228ENST00000533455 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
CTSB-228ENST00000533455 KRTAP5-10Q6L8G5 202 aa3.47□□□□□ -1.85
CTSB-228ENST00000533455 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
CTSB-228ENST00000533455 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
CTSB-228ENST00000533455 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
CTSB-228ENST00000533455 LCE1BQ5T7P3 118 aa3.38□□□□□ -1.87
CTSB-228ENST00000533455 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
CTSB-228ENST00000533455 LCE1CQ5T751 118 aa3.31□□□□□ -1.88
CTSB-228ENST00000533455 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
CTSB-228ENST00000533455 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
CTSB-228ENST00000533455 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
CTSB-228ENST00000533455 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
CTSB-228ENST00000533455 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
CTSB-228ENST00000533455 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
CTSB-228ENST00000533455 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
CTSB-228ENST00000533455 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
CTSB-228ENST00000533455 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
CTSB-228ENST00000533455 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
CTSB-228ENST00000533455 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
CTSB-228ENST00000533455 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
CTSB-228ENST00000533455 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms