RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CDC42SE1Q9NRR8 79 aa4.33□□□□□ -1.72
SSBP3-214ENST00000533209 MT1LQ93083 61 aa4.29□□□□□ -1.72
SSBP3-214ENST00000533209 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
SSBP3-214ENST00000533209 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
SSBP3-214ENST00000533209 MT1GP13640 62 aa4.28□□□□□ -1.72
SSBP3-214ENST00000533209 LCE3BQ5TA77 95 aa4.28□□□□□ -1.72
SSBP3-214ENST00000533209 KRTAP12-3P60328 96 aa4.26□□□□□ -1.73
SSBP3-214ENST00000533209 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
SSBP3-214ENST00000533209 KRTAP4-6Q9BYQ5 205 aa4.25□□□□□ -1.73
SSBP3-214ENST00000533209 ROMO1P60602 79 aa4.22□□□□□ -1.73
SSBP3-214ENST00000533209 PP632Q6XCG6 107 aa4.22□□□□□ -1.73
SSBP3-214ENST00000533209 MT1MQ8N339 61 aa4.22□□□□□ -1.73
SSBP3-214ENST00000533209 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
SSBP3-214ENST00000533209 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
SSBP3-214ENST00000533209 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
SSBP3-214ENST00000533209 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
SSBP3-214ENST00000533209 BRK1Q8WUW1 75 aa4.07□□□□□ -1.76
SSBP3-214ENST00000533209 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
SSBP3-214ENST00000533209 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
SSBP3-214ENST00000533209 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
SSBP3-214ENST00000533209 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
SSBP3-214ENST00000533209 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
SSBP3-214ENST00000533209 KRTAP5-4Q6L8H1 288 aa3.91□□□□□ -1.78
SSBP3-214ENST00000533209 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
SSBP3-214ENST00000533209 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
SSBP3-214ENST00000533209 MT4P47944 62 aa3.85□□□□□ -1.79
SSBP3-214ENST00000533209 HMCN1Q96RW7 5635 aa3.83□□□□□ -1.8
SSBP3-214ENST00000533209 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
SSBP3-214ENST00000533209 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
SSBP3-214ENST00000533209 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
SSBP3-214ENST00000533209 PRO0628Q9UI54 55 aa3.72□□□□□ -1.81
SSBP3-214ENST00000533209 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
SSBP3-214ENST00000533209 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
SSBP3-214ENST00000533209 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
SSBP3-214ENST00000533209 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
SSBP3-214ENST00000533209 MT1AP04731 61 aa3.65□□□□□ -1.83
SSBP3-214ENST00000533209 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
SSBP3-214ENST00000533209 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
SSBP3-214ENST00000533209 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
SSBP3-214ENST00000533209 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
SSBP3-214ENST00000533209 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
SSBP3-214ENST00000533209 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
SSBP3-214ENST00000533209 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
SSBP3-214ENST00000533209 GPR98Q8WXG9 6306 aa3.55□□□□□ -1.84
SSBP3-214ENST00000533209 KRTAP5-10Q6L8G5 202 aa3.51□□□□□ -1.85
SSBP3-214ENST00000533209 KTN1-AS1Q86SY8 53 aa3.51□□□□□ -1.85
SSBP3-214ENST00000533209 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
SSBP3-214ENST00000533209 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
SSBP3-214ENST00000533209 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
SSBP3-214ENST00000533209 MT3P25713 68 aa3.32□□□□□ -1.88
SSBP3-214ENST00000533209 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
SSBP3-214ENST00000533209 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
SSBP3-214ENST00000533209 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
SSBP3-214ENST00000533209 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
SSBP3-214ENST00000533209 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
SSBP3-214ENST00000533209 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
SSBP3-214ENST00000533209 LCE1EQ5T753 118 aa3□□□□□ -1.93
SSBP3-214ENST00000533209 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
SSBP3-214ENST00000533209 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
SSBP3-214ENST00000533209 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
SSBP3-214ENST00000533209 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
SSBP3-214ENST00000533209 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
SSBP3-214ENST00000533209 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SSBP3-214ENST00000533209 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
SSBP3-214ENST00000533209 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
SSBP3-214ENST00000533209 H3BS24 57 aa2.57□□□□□ -2
SSBP3-214ENST00000533209 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.57□□□□□ -2
SSBP3-214ENST00000533209 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
SSBP3-214ENST00000533209 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
SSBP3-214ENST00000533209 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SSBP3-214ENST00000533209 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
SSBP3-214ENST00000533209 PRM1P04553 51 aa2.17□□□□□ -2.06
SSBP3-214ENST00000533209 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
SSBP3-214ENST00000533209 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
SSBP3-214ENST00000533209 INE1O15225 51 aa2.13□□□□□ -2.07
SSBP3-214ENST00000533209 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
SSBP3-214ENST00000533209 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SSBP3-214ENST00000533209 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 471.7 ms