RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 FAT1Q14517 4588 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 A0A096LNI7 61 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 DEFB124Q8NES8 71 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 LAMA1P25391 3075 aa0.56□□□□□ -2.32
LMO7-222ENST00000532785 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
LMO7-222ENST00000532785 FAT4Q6V0I7 4981 aa0.55□□□□□ -2.32
LMO7-222ENST00000532785 SPINK6Q6UWN8 80 aa0.55□□□□□ -2.32
LMO7-222ENST00000532785 LRP1Q07954 4544 aaKnown RBP0.55□□□□□ -2.32
LMO7-222ENST00000532785 MYO15AQ9UKN7 3530 aa0.55□□□□□ -2.32
LMO7-222ENST00000532785 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
LMO7-222ENST00000532785 VPS13CQ709C8 3753 aa0.54□□□□□ -2.32
LMO7-222ENST00000532785 WDFY3Q8IZQ1 3526 aa0.54□□□□□ -2.32
LMO7-222ENST00000532785 FREM2Q5SZK8 3169 aa0.54□□□□□ -2.32
LMO7-222ENST00000532785 CDH23Q9H251 3354 aa0.54□□□□□ -2.32
LMO7-222ENST00000532785 KRTAP2-3P0C7H8 128 aa0.53□□□□□ -2.32
LMO7-222ENST00000532785 CD52P31358 61 aa0.53□□□□□ -2.32
LMO7-222ENST00000532785 KRTAP2-4Q9BYR9 128 aa0.53□□□□□ -2.32
LMO7-222ENST00000532785 KRTAP2-1Q9BYU5 128 aa0.53□□□□□ -2.32
LMO7-222ENST00000532785 CSMD2Q7Z408 3487 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 KMT2DO14686 5537 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 SVEP1Q4LDE5 3571 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 A0A096LPF7 62 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 TNP1P09430 55 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 LINC01556Q5JQF7 62 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 Q9Y3F1 56 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 ADGRG4Q8IZF6 3080 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 LRP1BQ9NZR2 4599 aa0.52□□□□□ -2.33
LMO7-222ENST00000532785 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
LMO7-222ENST00000532785 CUBNO60494 3623 aa0.51□□□□□ -2.33
LMO7-222ENST00000532785 H3BNG1 76 aa0.51□□□□□ -2.33
LMO7-222ENST00000532785 SPART-AS1P0CW21 52 aa0.51□□□□□ -2.33
LMO7-222ENST00000532785 DEFB135Q30KP9 77 aa0.51□□□□□ -2.33
LMO7-222ENST00000532785 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
LMO7-222ENST00000532785 STARD9Q9P2P6 4700 aa0.49□□□□□ -2.33
LMO7-222ENST00000532785 C9orf92A6NGG3 77 aa0.49□□□□□ -2.33
LMO7-222ENST00000532785 M0R2T5 61 aa0.49□□□□□ -2.33
LMO7-222ENST00000532785 SMR3AQ99954 134 aa0.49□□□□□ -2.33
LMO7-222ENST00000532785 KRTAP8-1Q8IUC2 63 aa0.48□□□□□ -2.33
LMO7-222ENST00000532785 DSTQ03001 7570 aaKnown RBP0.48□□□□□ -2.33
LMO7-222ENST00000532785 HMCN2Q8NDA2 5059 aa0.47□□□□□ -2.33
LMO7-222ENST00000532785 RNF213Q63HN8 5207 aa0.47□□□□□ -2.33
LMO7-222ENST00000532785 RPS29P62273 56 aaKnown RBP0.47□□□□□ -2.33
LMO7-222ENST00000532785 DEFB133Q30KQ1 61 aa0.47□□□□□ -2.33
LMO7-222ENST00000532785 LRP2P98164 4655 aa0.47□□□□□ -2.33
LMO7-222ENST00000532785 U3KQA8 63 aa0.45□□□□□ -2.34
LMO7-222ENST00000532785 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
LMO7-222ENST00000532785 PRM1P04553 51 aa0.44□□□□□ -2.34
LMO7-222ENST00000532785 HTN3P15516 51 aa0.44□□□□□ -2.34
LMO7-222ENST00000532785 SMR3BP02814 79 aaPredicted RBP0.43□□□□□ -2.34
LMO7-222ENST00000532785 DEFB4AO15263 64 aa0.42□□□□□ -2.34
LMO7-222ENST00000532785 KRTAP19-5Q3LI72 72 aa0.41□□□□□ -2.34
LMO7-222ENST00000532785 MUC12Q9UKN1 5478 aa0.4□□□□□ -2.34
LMO7-222ENST00000532785 MT1AP04731 61 aa0.39□□□□□ -2.35
LMO7-222ENST00000532785 USH2AO75445 5202 aa0.39□□□□□ -2.35
LMO7-222ENST00000532785 SPRR2DP22532 72 aa0.36□□□□□ -2.35
LMO7-222ENST00000532785 SPRR2BP35325 72 aa0.36□□□□□ -2.35
LMO7-222ENST00000532785 KRTAP6-2Q3LI66 62 aa0.36□□□□□ -2.35
LMO7-222ENST00000532785 SPRR2AP35326 72 aa0.34□□□□□ -2.36
LMO7-222ENST00000532785 SPRR2FQ96RM1 72 aa0.34□□□□□ -2.36
LMO7-222ENST00000532785 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
LMO7-222ENST00000532785 MT1EP04732 61 aa0.32□□□□□ -2.36
LMO7-222ENST00000532785 SPRR2EP22531 72 aa0.32□□□□□ -2.36
LMO7-222ENST00000532785 SPRR2GQ9BYE4 73 aa0.32□□□□□ -2.36
LMO7-222ENST00000532785 MT1LQ93083 61 aa0.3□□□□□ -2.36
LMO7-222ENST00000532785 MT1HP80294 61 aa0.28□□□□□ -2.36
LMO7-222ENST00000532785 MT1XP80297 61 aa0.28□□□□□ -2.36
LMO7-222ENST00000532785 KRTAP19-2Q3LHN2 52 aa0.28□□□□□ -2.36
LMO7-222ENST00000532785 KRTAP19-8Q3LI54 63 aa0.28□□□□□ -2.36
LMO7-222ENST00000532785 MT4P47944 62 aa0.27□□□□□ -2.37
LMO7-222ENST00000532785 KRTAP19-7Q3SYF9 63 aa0.26□□□□□ -2.37
LMO7-222ENST00000532785 MT1BP07438 61 aa0.24□□□□□ -2.37
LMO7-222ENST00000532785 MT1GP13640 62 aa0.24□□□□□ -2.37
LMO7-222ENST00000532785 KRTAP6-1Q3LI64 71 aa0.22□□□□□ -2.37
LMO7-222ENST00000532785 MT2AP02795 61 aa0.21□□□□□ -2.38
LMO7-222ENST00000532785 MT1MQ8N339 61 aa0.21□□□□□ -2.38
LMO7-222ENST00000532785 MT1FP04733 61 aa0.17□□□□□ -2.38
LMO7-222ENST00000532785 MT1HL1P0DM35 61 aa0.16□□□□□ -2.38
LMO7-222ENST00000532785 KRTAP20-2Q3LI61 65 aa0.14□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 102.9 ms