RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 KRTAP19-5Q3LI72 72 aa6.92□□□□□ -1.3
SSH3-209ENST00000532600 K7ERS5 55 aa6.91□□□□□ -1.3
SSH3-209ENST00000532600 LCE3AQ5TA76 89 aa6.85□□□□□ -1.31
SSH3-209ENST00000532600 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
SSH3-209ENST00000532600 CDC42SE1Q9NRR8 79 aa6.85□□□□□ -1.31
SSH3-209ENST00000532600 MT1GP13640 62 aa6.82□□□□□ -1.32
SSH3-209ENST00000532600 MT1MQ8N339 61 aa6.75□□□□□ -1.33
SSH3-209ENST00000532600 MT1LQ93083 61 aa6.75□□□□□ -1.33
SSH3-209ENST00000532600 KRTAP25-1Q3LHN0 102 aa6.74□□□□□ -1.33
SSH3-209ENST00000532600 GPR98Q8WXG9 6306 aa6.73□□□□□ -1.33
SSH3-209ENST00000532600 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
SSH3-209ENST00000532600 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
SSH3-209ENST00000532600 KRTAP4-3Q9BYR4 195 aa6.64□□□□□ -1.35
SSH3-209ENST00000532600 ROMO1P60602 79 aa6.62□□□□□ -1.35
SSH3-209ENST00000532600 HMCN1Q96RW7 5635 aa6.59□□□□□ -1.35
SSH3-209ENST00000532600 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
SSH3-209ENST00000532600 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
SSH3-209ENST00000532600 MT4P47944 62 aa6.55□□□□□ -1.36
SSH3-209ENST00000532600 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
SSH3-209ENST00000532600 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
SSH3-209ENST00000532600 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
SSH3-209ENST00000532600 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
SSH3-209ENST00000532600 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
SSH3-209ENST00000532600 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
SSH3-209ENST00000532600 KRTAP5-10Q6L8G5 202 aa6.27□□□□□ -1.41
SSH3-209ENST00000532600 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
SSH3-209ENST00000532600 KRTAP5-5Q701N2 237 aaPredicted RBP6.24□□□□□ -1.41
SSH3-209ENST00000532600 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
SSH3-209ENST00000532600 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
SSH3-209ENST00000532600 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
SSH3-209ENST00000532600 KRTAP19-4Q3LI73 84 aa6.1□□□□□ -1.43
SSH3-209ENST00000532600 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
SSH3-209ENST00000532600 KRTAP5-3Q6L8H2 238 aa6.08□□□□□ -1.44
SSH3-209ENST00000532600 SPRR5A0A1B0GTR4 108 aa6.07□□□□□ -1.44
SSH3-209ENST00000532600 KRTAP5-7Q6L8G8 165 aa6.02□□□□□ -1.45
SSH3-209ENST00000532600 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
SSH3-209ENST00000532600 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
SSH3-209ENST00000532600 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
SSH3-209ENST00000532600 PRAC1Q96KF2 57 aa5.91□□□□□ -1.46
SSH3-209ENST00000532600 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
SSH3-209ENST00000532600 KRTAP6-1Q3LI64 71 aa5.73□□□□□ -1.49
SSH3-209ENST00000532600 MT1AP04731 61 aa5.72□□□□□ -1.49
SSH3-209ENST00000532600 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
SSH3-209ENST00000532600 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
SSH3-209ENST00000532600 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
SSH3-209ENST00000532600 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
SSH3-209ENST00000532600 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
SSH3-209ENST00000532600 KRTAP5-8O75690 187 aa5.46□□□□□ -1.54
SSH3-209ENST00000532600 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
SSH3-209ENST00000532600 MUC5BQ9HC84 5762 aaPredicted RBP5.28□□□□□ -1.56
SSH3-209ENST00000532600 MUC5ACP98088 5654 aa5.26□□□□□ -1.57
SSH3-209ENST00000532600 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
SSH3-209ENST00000532600 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
SSH3-209ENST00000532600 MT3P25713 68 aa5.2□□□□□ -1.58
SSH3-209ENST00000532600 KRTAP5-1Q6L8H4 278 aa5.14□□□□□ -1.59
SSH3-209ENST00000532600 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
SSH3-209ENST00000532600 LCE1EQ5T753 118 aa4.82□□□□□ -1.64
SSH3-209ENST00000532600 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
SSH3-209ENST00000532600 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
SSH3-209ENST00000532600 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
SSH3-209ENST00000532600 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
SSH3-209ENST00000532600 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
SSH3-209ENST00000532600 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
SSH3-209ENST00000532600 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
SSH3-209ENST00000532600 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
SSH3-209ENST00000532600 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
SSH3-209ENST00000532600 KRTAP5-11Q6L8G4 156 aa4.07□□□□□ -1.76
SSH3-209ENST00000532600 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
SSH3-209ENST00000532600 KRTAP21-2Q3LI59 83 aa3.79□□□□□ -1.8
SSH3-209ENST00000532600 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
SSH3-209ENST00000532600 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SSH3-209ENST00000532600 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
SSH3-209ENST00000532600 PRM1P04553 51 aa3.44□□□□□ -1.86
SSH3-209ENST00000532600 INE1O15225 51 aa3.43□□□□□ -1.86
SSH3-209ENST00000532600 H3BS24 57 aa3.34□□□□□ -1.87
SSH3-209ENST00000532600 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
SSH3-209ENST00000532600 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
SSH3-209ENST00000532600 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 144.2 ms