RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
NXF1-213ENST00000532297 KRTAP4-3Q9BYR4 195 aa5□□□□□ -1.61
NXF1-213ENST00000532297 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
NXF1-213ENST00000532297 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
NXF1-213ENST00000532297 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
NXF1-213ENST00000532297 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
NXF1-213ENST00000532297 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
NXF1-213ENST00000532297 MT1GP13640 62 aa4.85□□□□□ -1.63
NXF1-213ENST00000532297 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
NXF1-213ENST00000532297 KRTAP12-4P60329 112 aa4.77□□□□□ -1.65
NXF1-213ENST00000532297 SYNE2Q8WXH0 6885 aaKnown RBP4.74□□□□□ -1.65
NXF1-213ENST00000532297 MT1MQ8N339 61 aa4.72□□□□□ -1.65
NXF1-213ENST00000532297 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
NXF1-213ENST00000532297 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.67
NXF1-213ENST00000532297 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
NXF1-213ENST00000532297 SPRR2FQ96RM1 72 aa4.6□□□□□ -1.67
NXF1-213ENST00000532297 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
NXF1-213ENST00000532297 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
NXF1-213ENST00000532297 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
NXF1-213ENST00000532297 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
NXF1-213ENST00000532297 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
NXF1-213ENST00000532297 MT1AP04731 61 aa4.32□□□□□ -1.72
NXF1-213ENST00000532297 KRTAP9-6A0A140TA67 174 aa4.32□□□□□ -1.72
NXF1-213ENST00000532297 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
NXF1-213ENST00000532297 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
NXF1-213ENST00000532297 KRTAP9-7A8MTY7 169 aa4.28□□□□□ -1.72
NXF1-213ENST00000532297 PRM1P04553 51 aa4.27□□□□□ -1.73
NXF1-213ENST00000532297 LCE3EQ5T5B0 92 aa4.25□□□□□ -1.73
NXF1-213ENST00000532297 LCE1AQ5T7P2 110 aa4.24□□□□□ -1.73
NXF1-213ENST00000532297 KRTAP5-5Q701N2 237 aaPredicted RBP4.24□□□□□ -1.73
NXF1-213ENST00000532297 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
NXF1-213ENST00000532297 SPRR2EP22531 72 aa4.21□□□□□ -1.73
NXF1-213ENST00000532297 SPRR2BP35325 72 aa4.21□□□□□ -1.73
NXF1-213ENST00000532297 SPRR2AP35326 72 aa4.21□□□□□ -1.73
NXF1-213ENST00000532297 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.15□□□□□ -1.74
NXF1-213ENST00000532297 SPRR2DP22532 72 aa4.02□□□□□ -1.77
NXF1-213ENST00000532297 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
NXF1-213ENST00000532297 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
NXF1-213ENST00000532297 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
NXF1-213ENST00000532297 NEBP20929 6669 aa3.94□□□□□ -1.78
NXF1-213ENST00000532297 MT3P25713 68 aa3.8□□□□□ -1.8
NXF1-213ENST00000532297 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
NXF1-213ENST00000532297 MT4P47944 62 aa3.66□□□□□ -1.82
NXF1-213ENST00000532297 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
NXF1-213ENST00000532297 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
NXF1-213ENST00000532297 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
NXF1-213ENST00000532297 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
NXF1-213ENST00000532297 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
NXF1-213ENST00000532297 KRTAP20-2Q3LI61 65 aa3.41□□□□□ -1.86
NXF1-213ENST00000532297 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
NXF1-213ENST00000532297 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
NXF1-213ENST00000532297 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
NXF1-213ENST00000532297 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
NXF1-213ENST00000532297 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
NXF1-213ENST00000532297 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
NXF1-213ENST00000532297 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
NXF1-213ENST00000532297 KRTAP5-10Q6L8G5 202 aa3.07□□□□□ -1.92
NXF1-213ENST00000532297 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
NXF1-213ENST00000532297 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
NXF1-213ENST00000532297 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
NXF1-213ENST00000532297 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
NXF1-213ENST00000532297 GPR98Q8WXG9 6306 aa2.87□□□□□ -1.95
NXF1-213ENST00000532297 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
NXF1-213ENST00000532297 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
NXF1-213ENST00000532297 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
NXF1-213ENST00000532297 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
NXF1-213ENST00000532297 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
NXF1-213ENST00000532297 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
NXF1-213ENST00000532297 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
NXF1-213ENST00000532297 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
NXF1-213ENST00000532297 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
NXF1-213ENST00000532297 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
NXF1-213ENST00000532297 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
NXF1-213ENST00000532297 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
NXF1-213ENST00000532297 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
NXF1-213ENST00000532297 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
NXF1-213ENST00000532297 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 14.4 ms