RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
PUF60-218ENST00000531995 MT1EP04732 61 aa6.87□□□□□ -1.31
PUF60-218ENST00000531995 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
PUF60-218ENST00000531995 LCE5AQ5TCM9 118 aa6.86□□□□□ -1.31
PUF60-218ENST00000531995 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
PUF60-218ENST00000531995 KRTAP19-3Q7Z4W3 81 aa6.81□□□□□ -1.32
PUF60-218ENST00000531995 KRTAP25-1Q3LHN0 102 aa6.78□□□□□ -1.32
PUF60-218ENST00000531995 BRK1Q8WUW1 75 aa6.78□□□□□ -1.32
PUF60-218ENST00000531995 PRO0628Q9UI54 55 aa6.76□□□□□ -1.33
PUF60-218ENST00000531995 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
PUF60-218ENST00000531995 HMCN1Q96RW7 5635 aa6.65□□□□□ -1.34
PUF60-218ENST00000531995 ROMO1P60602 79 aa6.63□□□□□ -1.35
PUF60-218ENST00000531995 MT1LQ93083 61 aa6.62□□□□□ -1.35
PUF60-218ENST00000531995 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
PUF60-218ENST00000531995 MT1GP13640 62 aa6.59□□□□□ -1.35
PUF60-218ENST00000531995 KRTAP23-1A1A580 65 aa6.58□□□□□ -1.36
PUF60-218ENST00000531995 MT4P47944 62 aa6.58□□□□□ -1.36
PUF60-218ENST00000531995 SVIPQ8NHG7 77 aa6.58□□□□□ -1.36
PUF60-218ENST00000531995 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
PUF60-218ENST00000531995 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
PUF60-218ENST00000531995 MT1MQ8N339 61 aa6.52□□□□□ -1.37
PUF60-218ENST00000531995 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
PUF60-218ENST00000531995 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
PUF60-218ENST00000531995 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
PUF60-218ENST00000531995 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
PUF60-218ENST00000531995 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
PUF60-218ENST00000531995 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
PUF60-218ENST00000531995 KRTAP5-10Q6L8G5 202 aa6.31□□□□□ -1.4
PUF60-218ENST00000531995 KRTAP15-1Q3LI76 137 aa6.3□□□□□ -1.4
PUF60-218ENST00000531995 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
PUF60-218ENST00000531995 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
PUF60-218ENST00000531995 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PUF60-218ENST00000531995 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
PUF60-218ENST00000531995 KRTAP5-7Q6L8G8 165 aa6.08□□□□□ -1.44
PUF60-218ENST00000531995 KRTAP20-2Q3LI61 65 aa6.05□□□□□ -1.44
PUF60-218ENST00000531995 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
PUF60-218ENST00000531995 KRTAP5-5Q701N2 237 aaPredicted RBP5.99□□□□□ -1.45
PUF60-218ENST00000531995 PRAC1Q96KF2 57 aa5.96□□□□□ -1.46
PUF60-218ENST00000531995 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
PUF60-218ENST00000531995 KRTAP12-4P60329 112 aa5.87□□□□□ -1.47
PUF60-218ENST00000531995 KRTAP9-6A8MVA2 160 aa5.86□□□□□ -1.47
PUF60-218ENST00000531995 SYNE1Q8NF91 8797 aaKnown RBP5.85□□□□□ -1.47
PUF60-218ENST00000531995 MT1AP04731 61 aa5.63□□□□□ -1.51
PUF60-218ENST00000531995 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
PUF60-218ENST00000531995 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
PUF60-218ENST00000531995 KRTAP5-2Q701N4 177 aa5.53□□□□□ -1.52
PUF60-218ENST00000531995 AHNAKQ09666 5890 aaKnown RBP5.43□□□□□ -1.54
PUF60-218ENST00000531995 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
PUF60-218ENST00000531995 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
PUF60-218ENST00000531995 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
PUF60-218ENST00000531995 MUC5ACP98088 5654 aa5.4□□□□□ -1.55
PUF60-218ENST00000531995 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
PUF60-218ENST00000531995 OBSCNQ5VST9 7968 aa5.3□□□□□ -1.56
PUF60-218ENST00000531995 KRTAP9-9Q9BYP9 154 aa5.16□□□□□ -1.58
PUF60-218ENST00000531995 MT3P25713 68 aa5.11□□□□□ -1.59
PUF60-218ENST00000531995 KRTAP5-1Q6L8H4 278 aa5□□□□□ -1.61
PUF60-218ENST00000531995 LUZP6Q538Z0 58 aa4.89□□□□□ -1.63
PUF60-218ENST00000531995 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
PUF60-218ENST00000531995 H3BS24 57 aa4.75□□□□□ -1.65
PUF60-218ENST00000531995 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
PUF60-218ENST00000531995 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
PUF60-218ENST00000531995 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
PUF60-218ENST00000531995 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
PUF60-218ENST00000531995 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
PUF60-218ENST00000531995 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
PUF60-218ENST00000531995 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
PUF60-218ENST00000531995 KRTAP4-12Q9BQ66 201 aa4.2□□□□□ -1.74
PUF60-218ENST00000531995 INE1O15225 51 aa4.07□□□□□ -1.76
PUF60-218ENST00000531995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
PUF60-218ENST00000531995 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
PUF60-218ENST00000531995 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
PUF60-218ENST00000531995 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
PUF60-218ENST00000531995 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
PUF60-218ENST00000531995 PRM1P04553 51 aa3.43□□□□□ -1.86
PUF60-218ENST00000531995 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
PUF60-218ENST00000531995 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
PUF60-218ENST00000531995 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
PUF60-218ENST00000531995 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms