RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 CDC42SE1Q9NRR8 79 aa7.59□□□□□ -1.19
CCS-207ENST00000531990 KRTAP19-3Q7Z4W3 81 aa7.58□□□□□ -1.2
CCS-207ENST00000531990 LCE5AQ5TCM9 118 aa7.53□□□□□ -1.2
CCS-207ENST00000531990 LCE3BQ5TA77 95 aa7.48□□□□□ -1.21
CCS-207ENST00000531990 MT1GP13640 62 aa7.46□□□□□ -1.22
CCS-207ENST00000531990 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
CCS-207ENST00000531990 KRTAP12-3P60328 96 aa7.43□□□□□ -1.22
CCS-207ENST00000531990 MT1LQ93083 61 aa7.42□□□□□ -1.22
CCS-207ENST00000531990 ROMO1P60602 79 aa7.4□□□□□ -1.22
CCS-207ENST00000531990 KRTAP23-1A1A580 65 aa7.35□□□□□ -1.23
CCS-207ENST00000531990 MT1MQ8N339 61 aa7.31□□□□□ -1.24
CCS-207ENST00000531990 BRK1Q8WUW1 75 aa7.17□□□□□ -1.26
CCS-207ENST00000531990 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
CCS-207ENST00000531990 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
CCS-207ENST00000531990 GPR98Q8WXG9 6306 aa7.07□□□□□ -1.28
CCS-207ENST00000531990 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
CCS-207ENST00000531990 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
CCS-207ENST00000531990 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
CCS-207ENST00000531990 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
CCS-207ENST00000531990 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
CCS-207ENST00000531990 LCE4AQ5TA78 99 aa6.85□□□□□ -1.31
CCS-207ENST00000531990 PMAIP1Q13794 54 aa6.76□□□□□ -1.33
CCS-207ENST00000531990 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
CCS-207ENST00000531990 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
CCS-207ENST00000531990 MT4P47944 62 aa6.72□□□□□ -1.33
CCS-207ENST00000531990 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
CCS-207ENST00000531990 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
CCS-207ENST00000531990 KRTAP5-5Q701N2 237 aaPredicted RBP6.64□□□□□ -1.35
CCS-207ENST00000531990 AHNAK2Q8IVF2 5795 aa6.61□□□□□ -1.35
CCS-207ENST00000531990 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
CCS-207ENST00000531990 PRO0628Q9UI54 55 aa6.53□□□□□ -1.36
CCS-207ENST00000531990 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
CCS-207ENST00000531990 KRTAP5-10Q6L8G5 202 aa6.42□□□□□ -1.38
CCS-207ENST00000531990 KRTAP9-6A8MVA2 160 aa6.41□□□□□ -1.38
CCS-207ENST00000531990 SPRR5A0A1B0GTR4 108 aa6.39□□□□□ -1.39
CCS-207ENST00000531990 SVIPQ8NHG7 77 aa6.39□□□□□ -1.39
CCS-207ENST00000531990 PRAC1Q96KF2 57 aa6.39□□□□□ -1.39
CCS-207ENST00000531990 KRTAP20-2Q3LI61 65 aa6.36□□□□□ -1.39
CCS-207ENST00000531990 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
CCS-207ENST00000531990 MT1AP04731 61 aa6.33□□□□□ -1.4
CCS-207ENST00000531990 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
CCS-207ENST00000531990 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
CCS-207ENST00000531990 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
CCS-207ENST00000531990 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
CCS-207ENST00000531990 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
CCS-207ENST00000531990 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
CCS-207ENST00000531990 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
CCS-207ENST00000531990 MT3P25713 68 aa5.8□□□□□ -1.48
CCS-207ENST00000531990 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
CCS-207ENST00000531990 KRTAP5-8O75690 187 aa5.51□□□□□ -1.53
CCS-207ENST00000531990 AHNAKQ09666 5890 aaKnown RBP5.5□□□□□ -1.53
CCS-207ENST00000531990 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
CCS-207ENST00000531990 MUC5ACP98088 5654 aa5.44□□□□□ -1.54
CCS-207ENST00000531990 LUZP6Q538Z0 58 aa5.42□□□□□ -1.54
CCS-207ENST00000531990 OBSCNQ5VST9 7968 aa5.39□□□□□ -1.55
CCS-207ENST00000531990 KRTAP5-1Q6L8H4 278 aa5.28□□□□□ -1.56
CCS-207ENST00000531990 LCE1EQ5T753 118 aa5.22□□□□□ -1.57
CCS-207ENST00000531990 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
CCS-207ENST00000531990 H3BS24 57 aa5.09□□□□□ -1.59
CCS-207ENST00000531990 LCE3DQ9BYE3 92 aa5.04□□□□□ -1.6
CCS-207ENST00000531990 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
CCS-207ENST00000531990 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
CCS-207ENST00000531990 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
CCS-207ENST00000531990 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
CCS-207ENST00000531990 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CCS-207ENST00000531990 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
CCS-207ENST00000531990 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
CCS-207ENST00000531990 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
CCS-207ENST00000531990 KRTAP4-12Q9BQ66 201 aa4.3□□□□□ -1.72
CCS-207ENST00000531990 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
CCS-207ENST00000531990 KRTAP21-2Q3LI59 83 aa4.1□□□□□ -1.75
CCS-207ENST00000531990 INE1O15225 51 aa3.8□□□□□ -1.8
CCS-207ENST00000531990 PRM1P04553 51 aa3.8□□□□□ -1.8
CCS-207ENST00000531990 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
CCS-207ENST00000531990 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
CCS-207ENST00000531990 MUC19Q7Z5P9 8384 aa3.35□□□□□ -1.87
CCS-207ENST00000531990 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
CCS-207ENST00000531990 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 80.2 ms