RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 RYR3Q15413 4870 aa1.74□□□□□ -2.13
ECHDC1-222ENST00000531967 LRP2P98164 4655 aa1.74□□□□□ -2.13
ECHDC1-222ENST00000531967 LPAP08519 4548 aa1.72□□□□□ -2.13
ECHDC1-222ENST00000531967 KIAA1109Q2LD37 5005 aa1.72□□□□□ -2.13
ECHDC1-222ENST00000531967 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
ECHDC1-222ENST00000531967 KRTAP9-6A8MVA2 160 aa1.7□□□□□ -2.14
ECHDC1-222ENST00000531967 MUC17Q685J3 4493 aa1.69□□□□□ -2.14
ECHDC1-222ENST00000531967 ABCA13Q86UQ4 5058 aa1.68□□□□□ -2.14
ECHDC1-222ENST00000531967 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-222ENST00000531967 EPPK1P58107 5090 aaKnown RBP1.65□□□□□ -2.14
ECHDC1-222ENST00000531967 UBR4Q5T4S7 5183 aa1.65□□□□□ -2.15
ECHDC1-222ENST00000531967 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
ECHDC1-222ENST00000531967 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
ECHDC1-222ENST00000531967 HERC2O95714 4834 aa1.62□□□□□ -2.15
ECHDC1-222ENST00000531967 KRTAP8-1Q8IUC2 63 aa1.62□□□□□ -2.15
ECHDC1-222ENST00000531967 HERC1Q15751 4861 aa1.58□□□□□ -2.16
ECHDC1-222ENST00000531967 M0R2T5 61 aa1.58□□□□□ -2.16
ECHDC1-222ENST00000531967 LCE3AQ5TA76 89 aa1.57□□□□□ -2.16
ECHDC1-222ENST00000531967 KRTAP2-3P0C7H8 128 aa1.56□□□□□ -2.16
ECHDC1-222ENST00000531967 SPRR2GQ9BYE4 73 aa1.56□□□□□ -2.16
ECHDC1-222ENST00000531967 KRTAP2-4Q9BYR9 128 aa1.56□□□□□ -2.16
ECHDC1-222ENST00000531967 KRTAP2-1Q9BYU5 128 aa1.56□□□□□ -2.16
ECHDC1-222ENST00000531967 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
ECHDC1-222ENST00000531967 MUC2Q02817 5179 aa1.55□□□□□ -2.16
ECHDC1-222ENST00000531967 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
ECHDC1-222ENST00000531967 HMCN2Q8NDA2 5059 aa1.52□□□□□ -2.17
ECHDC1-222ENST00000531967 MT1HP80294 61 aa1.5□□□□□ -2.17
ECHDC1-222ENST00000531967 KRTAP19-8Q3LI54 63 aa1.49□□□□□ -2.17
ECHDC1-222ENST00000531967 MT2AP02795 61 aa1.48□□□□□ -2.17
ECHDC1-222ENST00000531967 MT1FP04733 61 aa1.47□□□□□ -2.17
ECHDC1-222ENST00000531967 FAT4Q6V0I7 4981 aa1.46□□□□□ -2.18
ECHDC1-222ENST00000531967 RNF213Q63HN8 5207 aa1.46□□□□□ -2.18
ECHDC1-222ENST00000531967 MT1XP80297 61 aa1.44□□□□□ -2.18
ECHDC1-222ENST00000531967 CRCT1Q9UGL9 99 aa1.44□□□□□ -2.18
ECHDC1-222ENST00000531967 MT1BP07438 61 aa1.44□□□□□ -2.18
ECHDC1-222ENST00000531967 LCE1CQ5T751 118 aa1.44□□□□□ -2.18
ECHDC1-222ENST00000531967 LCE1BQ5T7P3 118 aa1.44□□□□□ -2.18
ECHDC1-222ENST00000531967 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
ECHDC1-222ENST00000531967 PRM1P04553 51 aa1.38□□□□□ -2.19
ECHDC1-222ENST00000531967 FSIP2Q5CZC0 6907 aa1.37□□□□□ -2.19
ECHDC1-222ENST00000531967 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
ECHDC1-222ENST00000531967 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
ECHDC1-222ENST00000531967 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
ECHDC1-222ENST00000531967 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
ECHDC1-222ENST00000531967 KRTAP19-7Q3SYF9 63 aa1.28□□□□□ -2.2
ECHDC1-222ENST00000531967 MT1EP04732 61 aa1.27□□□□□ -2.21
ECHDC1-222ENST00000531967 USH2AO75445 5202 aa1.26□□□□□ -2.21
ECHDC1-222ENST00000531967 KMT2DO14686 5537 aa1.26□□□□□ -2.21
ECHDC1-222ENST00000531967 MT1LQ93083 61 aa1.25□□□□□ -2.21
ECHDC1-222ENST00000531967 MT1AP04731 61 aa1.24□□□□□ -2.21
ECHDC1-222ENST00000531967 NEBP20929 6669 aa1.22□□□□□ -2.21
ECHDC1-222ENST00000531967 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
ECHDC1-222ENST00000531967 MT1GP13640 62 aa1.18□□□□□ -2.22
ECHDC1-222ENST00000531967 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
ECHDC1-222ENST00000531967 MACF1Q9UPN3 7388 aaKnown RBP1.17□□□□□ -2.22
ECHDC1-222ENST00000531967 MT1MQ8N339 61 aa1.16□□□□□ -2.22
ECHDC1-222ENST00000531967 KRTAP5-7Q6L8G8 165 aa1.15□□□□□ -2.22
ECHDC1-222ENST00000531967 SYNE1Q8NF91 8797 aaKnown RBP1.15□□□□□ -2.22
ECHDC1-222ENST00000531967 KRTAP6-2Q3LI66 62 aa1.15□□□□□ -2.23
ECHDC1-222ENST00000531967 SYNE2Q8WXH0 6885 aaKnown RBP1.14□□□□□ -2.23
ECHDC1-222ENST00000531967 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
ECHDC1-222ENST00000531967 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
ECHDC1-222ENST00000531967 MUC12Q9UKN1 5478 aa1.11□□□□□ -2.23
ECHDC1-222ENST00000531967 SPRR2DP22532 72 aa1.09□□□□□ -2.23
ECHDC1-222ENST00000531967 SPRR2BP35325 72 aa1.07□□□□□ -2.24
ECHDC1-222ENST00000531967 SPRR2AP35326 72 aa1.07□□□□□ -2.24
ECHDC1-222ENST00000531967 KRTAP5-10Q6L8G5 202 aa1.06□□□□□ -2.24
ECHDC1-222ENST00000531967 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
ECHDC1-222ENST00000531967 DSTQ03001 7570 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-222ENST00000531967 SPRR2EP22531 72 aa1.02□□□□□ -2.25
ECHDC1-222ENST00000531967 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
ECHDC1-222ENST00000531967 MDN1Q9NU22 5596 aa1.01□□□□□ -2.25
ECHDC1-222ENST00000531967 KRTAP20-2Q3LI61 65 aa0.83□□□□□ -2.28
ECHDC1-222ENST00000531967 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
ECHDC1-222ENST00000531967 MT4P47944 62 aa0.81□□□□□ -2.28
ECHDC1-222ENST00000531967 PHGR1C9JFL3 82 aa0.59□□□□□ -2.32
ECHDC1-222ENST00000531967 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 64.8 ms