RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
PPFIA1-216ENST00000530746 KRTAP19-3Q7Z4W3 81 aa5.49□□□□□ -1.53
PPFIA1-216ENST00000530746 KRTAP25-1Q3LHN0 102 aa5.47□□□□□ -1.53
PPFIA1-216ENST00000530746 DSTQ03001 7570 aaKnown RBP5.44□□□□□ -1.54
PPFIA1-216ENST00000530746 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
PPFIA1-216ENST00000530746 BRK1Q8WUW1 75 aa5.4□□□□□ -1.54
PPFIA1-216ENST00000530746 ROMO1P60602 79 aa5.39□□□□□ -1.55
PPFIA1-216ENST00000530746 MT1GP13640 62 aa5.38□□□□□ -1.55
PPFIA1-216ENST00000530746 H3BS24 57 aa5.37□□□□□ -1.55
PPFIA1-216ENST00000530746 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
PPFIA1-216ENST00000530746 KRTAP23-1A1A580 65 aa5.32□□□□□ -1.56
PPFIA1-216ENST00000530746 MT1LQ93083 61 aa5.32□□□□□ -1.56
PPFIA1-216ENST00000530746 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
PPFIA1-216ENST00000530746 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
PPFIA1-216ENST00000530746 MT1MQ8N339 61 aa5.28□□□□□ -1.56
PPFIA1-216ENST00000530746 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
PPFIA1-216ENST00000530746 KRTAP4-3Q9BYR4 195 aa5.15□□□□□ -1.59
PPFIA1-216ENST00000530746 PMAIP1Q13794 54 aa5.13□□□□□ -1.59
PPFIA1-216ENST00000530746 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
PPFIA1-216ENST00000530746 PRO0628Q9UI54 55 aa5.08□□□□□ -1.6
PPFIA1-216ENST00000530746 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
PPFIA1-216ENST00000530746 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
PPFIA1-216ENST00000530746 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
PPFIA1-216ENST00000530746 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
PPFIA1-216ENST00000530746 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
PPFIA1-216ENST00000530746 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
PPFIA1-216ENST00000530746 MT4P47944 62 aa4.97□□□□□ -1.61
PPFIA1-216ENST00000530746 HMCN1Q96RW7 5635 aa4.96□□□□□ -1.61
PPFIA1-216ENST00000530746 GPR98Q8WXG9 6306 aa4.9□□□□□ -1.62
PPFIA1-216ENST00000530746 KRTAP4-12Q9BQ66 201 aa4.87□□□□□ -1.63
PPFIA1-216ENST00000530746 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
PPFIA1-216ENST00000530746 LCE3CQ5T5A8 94 aa4.82□□□□□ -1.64
PPFIA1-216ENST00000530746 AHNAK2Q8IVF2 5795 aa4.76□□□□□ -1.65
PPFIA1-216ENST00000530746 KTN1-AS1Q86SY8 53 aa4.76□□□□□ -1.65
PPFIA1-216ENST00000530746 PRAC1Q96KF2 57 aa4.75□□□□□ -1.65
PPFIA1-216ENST00000530746 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
PPFIA1-216ENST00000530746 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
PPFIA1-216ENST00000530746 KRTAP12-4P60329 112 aa4.68□□□□□ -1.66
PPFIA1-216ENST00000530746 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
PPFIA1-216ENST00000530746 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
PPFIA1-216ENST00000530746 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
PPFIA1-216ENST00000530746 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
PPFIA1-216ENST00000530746 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
PPFIA1-216ENST00000530746 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
PPFIA1-216ENST00000530746 MT1AP04731 61 aa4.53□□□□□ -1.68
PPFIA1-216ENST00000530746 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
PPFIA1-216ENST00000530746 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
PPFIA1-216ENST00000530746 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
PPFIA1-216ENST00000530746 KRTAP5-2Q701N4 177 aa4.38□□□□□ -1.71
PPFIA1-216ENST00000530746 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
PPFIA1-216ENST00000530746 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
PPFIA1-216ENST00000530746 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
PPFIA1-216ENST00000530746 MT3P25713 68 aa4.15□□□□□ -1.75
PPFIA1-216ENST00000530746 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
PPFIA1-216ENST00000530746 KRTAP5-8O75690 187 aa4.11□□□□□ -1.75
PPFIA1-216ENST00000530746 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
PPFIA1-216ENST00000530746 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
PPFIA1-216ENST00000530746 AHNAKQ09666 5890 aaKnown RBP3.88□□□□□ -1.79
PPFIA1-216ENST00000530746 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
PPFIA1-216ENST00000530746 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
PPFIA1-216ENST00000530746 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
PPFIA1-216ENST00000530746 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
PPFIA1-216ENST00000530746 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
PPFIA1-216ENST00000530746 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
PPFIA1-216ENST00000530746 LCE1BQ5T7P3 118 aa3.54□□□□□ -1.84
PPFIA1-216ENST00000530746 LCE1CQ5T751 118 aa3.52□□□□□ -1.85
PPFIA1-216ENST00000530746 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
PPFIA1-216ENST00000530746 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
PPFIA1-216ENST00000530746 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
PPFIA1-216ENST00000530746 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
PPFIA1-216ENST00000530746 INE1O15225 51 aa3.03□□□□□ -1.92
PPFIA1-216ENST00000530746 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
PPFIA1-216ENST00000530746 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
PPFIA1-216ENST00000530746 PRM1P04553 51 aa2.74□□□□□ -1.97
PPFIA1-216ENST00000530746 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
PPFIA1-216ENST00000530746 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
PPFIA1-216ENST00000530746 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
PPFIA1-216ENST00000530746 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 101.9 ms