RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 M0QZ58 72 aa3.04□□□□□ -1.92
CHKA-205ENST00000530730 LINC01554Q52M75 96 aa3.04□□□□□ -1.92
CHKA-205ENST00000530730 V9GYY9 64 aa3.04□□□□□ -1.92
CHKA-205ENST00000530730 COA5Q86WW8 74 aa3.03□□□□□ -1.92
CHKA-205ENST00000530730 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
CHKA-205ENST00000530730 R4GN34 69 aa3.02□□□□□ -1.93
CHKA-205ENST00000530730 H7BZZ5 65 aa3.01□□□□□ -1.93
CHKA-205ENST00000530730 SPTSSBQ8NFR3 76 aa3.01□□□□□ -1.93
CHKA-205ENST00000530730 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
CHKA-205ENST00000530730 SPRR2EP22531 72 aa3□□□□□ -1.93
CHKA-205ENST00000530730 SPRR2BP35325 72 aa3□□□□□ -1.93
CHKA-205ENST00000530730 SPRR2AP35326 72 aa3□□□□□ -1.93
CHKA-205ENST00000530730 MT1XP80297 61 aa2.97□□□□□ -1.93
CHKA-205ENST00000530730 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
CHKA-205ENST00000530730 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
CHKA-205ENST00000530730 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
CHKA-205ENST00000530730 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
CHKA-205ENST00000530730 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
CHKA-205ENST00000530730 A0A0D9SG42 100 aa2.9□□□□□ -1.95
CHKA-205ENST00000530730 SPRR2DP22532 72 aa2.9□□□□□ -1.95
CHKA-205ENST00000530730 SPATA8Q6RVD6 105 aa2.89□□□□□ -1.95
CHKA-205ENST00000530730 PRO0628Q9UI54 55 aa2.89□□□□□ -1.95
CHKA-205ENST00000530730 SERP1Q9Y6X1 66 aa2.88□□□□□ -1.95
CHKA-205ENST00000530730 ATP5EP56381 51 aaPredicted RBP2.86□□□□□ -1.95
CHKA-205ENST00000530730 A0A1B0GU69 56 aa2.85□□□□□ -1.95
CHKA-205ENST00000530730 TMEM258P61165 79 aa2.85□□□□□ -1.95
CHKA-205ENST00000530730 A0A1B0GU33 70 aa2.84□□□□□ -1.95
CHKA-205ENST00000530730 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
CHKA-205ENST00000530730 SPINT4Q6UDR6 99 aa2.82□□□□□ -1.96
CHKA-205ENST00000530730 CAMK2N1Q7Z7J9 78 aa2.82□□□□□ -1.96
CHKA-205ENST00000530730 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
CHKA-205ENST00000530730 PRR15LQ9BU68 103 aa2.79□□□□□ -1.96
CHKA-205ENST00000530730 KRTAP12-1P59990 96 aa2.77□□□□□ -1.97
CHKA-205ENST00000530730 LINC01558Q9Y6Z2 57 aa2.76□□□□□ -1.97
CHKA-205ENST00000530730 PMAIP1Q13794 54 aa2.75□□□□□ -1.97
CHKA-205ENST00000530730 SMIM26A0A096LP01 95 aa2.74□□□□□ -1.97
CHKA-205ENST00000530730 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
CHKA-205ENST00000530730 PSPHP1O15172 72 aa2.73□□□□□ -1.97
CHKA-205ENST00000530730 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
CHKA-205ENST00000530730 UQCR11O14957 56 aa2.67□□□□□ -1.98
CHKA-205ENST00000530730 MIR22HGQ0VDD5 57 aa2.66□□□□□ -1.98
CHKA-205ENST00000530730 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
CHKA-205ENST00000530730 MT1EP04732 61 aa2.64□□□□□ -1.99
CHKA-205ENST00000530730 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
CHKA-205ENST00000530730 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
CHKA-205ENST00000530730 Q1T7F1 81 aa2.63□□□□□ -1.99
CHKA-205ENST00000530730 A6NED7 52 aa2.62□□□□□ -1.99
CHKA-205ENST00000530730 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
CHKA-205ENST00000530730 TNP1P09430 55 aa2.58□□□□□ -2
CHKA-205ENST00000530730 KRTAP19-5Q3LI72 72 aa2.58□□□□□ -2
CHKA-205ENST00000530730 MT1GP13640 62 aa2.57□□□□□ -2
CHKA-205ENST00000530730 AHNAK2Q8IVF2 5795 aa2.56□□□□□ -2
CHKA-205ENST00000530730 MT4P47944 62 aa2.56□□□□□ -2
CHKA-205ENST00000530730 K7ERS5 55 aa2.55□□□□□ -2
CHKA-205ENST00000530730 KTN1-AS1Q86SY8 53 aa2.55□□□□□ -2
CHKA-205ENST00000530730 MT1MQ8N339 61 aa2.52□□□□□ -2.01
CHKA-205ENST00000530730 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CHKA-205ENST00000530730 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
CHKA-205ENST00000530730 MT1LQ93083 61 aa2.49□□□□□ -2.01
CHKA-205ENST00000530730 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
CHKA-205ENST00000530730 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
CHKA-205ENST00000530730 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
CHKA-205ENST00000530730 BRK1Q8WUW1 75 aa2.44□□□□□ -2.02
CHKA-205ENST00000530730 ROMO1P60602 79 aa2.42□□□□□ -2.02
CHKA-205ENST00000530730 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
CHKA-205ENST00000530730 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
CHKA-205ENST00000530730 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
CHKA-205ENST00000530730 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
CHKA-205ENST00000530730 MUC5ACP98088 5654 aa2.14□□□□□ -2.07
CHKA-205ENST00000530730 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
CHKA-205ENST00000530730 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
CHKA-205ENST00000530730 MT1AP04731 61 aa2.11□□□□□ -2.07
CHKA-205ENST00000530730 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
CHKA-205ENST00000530730 INE1O15225 51 aa1.87□□□□□ -2.11
CHKA-205ENST00000530730 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
CHKA-205ENST00000530730 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
CHKA-205ENST00000530730 PRM1P04553 51 aa1.3□□□□□ -2.2
CHKA-205ENST00000530730 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 74.5 ms