RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 MT1LQ93083 61 aa6.02□□□□□ -1.45
RPL38-205ENST00000530646 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
RPL38-205ENST00000530646 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
RPL38-205ENST00000530646 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
RPL38-205ENST00000530646 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
RPL38-205ENST00000530646 MT1EP04732 61 aa5.92□□□□□ -1.46
RPL38-205ENST00000530646 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
RPL38-205ENST00000530646 LOC100996750A0A140TA64 210 aa5.83□□□□□ -1.48
RPL38-205ENST00000530646 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
RPL38-205ENST00000530646 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
RPL38-205ENST00000530646 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
RPL38-205ENST00000530646 MT1GP13640 62 aa5.69□□□□□ -1.5
RPL38-205ENST00000530646 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
RPL38-205ENST00000530646 SPRR2FQ96RM1 72 aa5.64□□□□□ -1.51
RPL38-205ENST00000530646 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
RPL38-205ENST00000530646 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
RPL38-205ENST00000530646 MT1MQ8N339 61 aa5.5□□□□□ -1.53
RPL38-205ENST00000530646 KRTAP4-9Q9BYQ8 210 aa5.45□□□□□ -1.54
RPL38-205ENST00000530646 LCE3BQ5TA77 95 aa5.41□□□□□ -1.54
RPL38-205ENST00000530646 LCE5AQ5TCM9 118 aa5.4□□□□□ -1.54
RPL38-205ENST00000530646 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
RPL38-205ENST00000530646 KRTAP5-9P26371 169 aa5.34□□□□□ -1.56
RPL38-205ENST00000530646 PRM1P04553 51 aa5.32□□□□□ -1.56
RPL38-205ENST00000530646 KRTAP9-6A0A140TA67 174 aa5.32□□□□□ -1.56
RPL38-205ENST00000530646 MT1AP04731 61 aa5.32□□□□□ -1.56
RPL38-205ENST00000530646 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
RPL38-205ENST00000530646 LCE1AQ5T7P2 110 aa5.31□□□□□ -1.56
RPL38-205ENST00000530646 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
RPL38-205ENST00000530646 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.3□□□□□ -1.56
RPL38-205ENST00000530646 SPRR2EP22531 72 aa5.24□□□□□ -1.57
RPL38-205ENST00000530646 SPRR2BP35325 72 aa5.24□□□□□ -1.57
RPL38-205ENST00000530646 SPRR2AP35326 72 aa5.24□□□□□ -1.57
RPL38-205ENST00000530646 KRTAP6-3Q3LI67 103 aa5.23□□□□□ -1.57
RPL38-205ENST00000530646 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
RPL38-205ENST00000530646 LCE3EQ5T5B0 92 aa5.21□□□□□ -1.58
RPL38-205ENST00000530646 KRTAP6-1Q3LI64 71 aa5.14□□□□□ -1.59
RPL38-205ENST00000530646 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
RPL38-205ENST00000530646 KRTAP4-6Q9BYQ5 205 aa5.04□□□□□ -1.6
RPL38-205ENST00000530646 SPRR2DP22532 72 aa5.02□□□□□ -1.61
RPL38-205ENST00000530646 KRTAP6-2Q3LI66 62 aa4.95□□□□□ -1.62
RPL38-205ENST00000530646 NEBP20929 6669 aa4.89□□□□□ -1.63
RPL38-205ENST00000530646 LCE4AQ5TA78 99 aa4.74□□□□□ -1.65
RPL38-205ENST00000530646 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
RPL38-205ENST00000530646 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
RPL38-205ENST00000530646 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
RPL38-205ENST00000530646 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
RPL38-205ENST00000530646 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
RPL38-205ENST00000530646 LCE1DQ5T752 114 aa4.51□□□□□ -1.69
RPL38-205ENST00000530646 MT4P47944 62 aa4.5□□□□□ -1.69
RPL38-205ENST00000530646 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
RPL38-205ENST00000530646 MT3P25713 68 aa4.44□□□□□ -1.7
RPL38-205ENST00000530646 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
RPL38-205ENST00000530646 KRTAP20-1Q3LI63 56 aa4.32□□□□□ -1.72
RPL38-205ENST00000530646 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
RPL38-205ENST00000530646 KRTAP5-2Q701N4 177 aa4.11□□□□□ -1.75
RPL38-205ENST00000530646 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.76
RPL38-205ENST00000530646 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
RPL38-205ENST00000530646 KRTAP4-11Q9BYQ6 195 aa4□□□□□ -1.77
RPL38-205ENST00000530646 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
RPL38-205ENST00000530646 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
RPL38-205ENST00000530646 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
RPL38-205ENST00000530646 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
RPL38-205ENST00000530646 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
RPL38-205ENST00000530646 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
RPL38-205ENST00000530646 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
RPL38-205ENST00000530646 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
RPL38-205ENST00000530646 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
RPL38-205ENST00000530646 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
RPL38-205ENST00000530646 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
RPL38-205ENST00000530646 KRTAP5-7Q6L8G8 165 aa3.29□□□□□ -1.88
RPL38-205ENST00000530646 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
RPL38-205ENST00000530646 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
RPL38-205ENST00000530646 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
RPL38-205ENST00000530646 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
RPL38-205ENST00000530646 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
RPL38-205ENST00000530646 AHNAKQ09666 5890 aaKnown RBP2.66□□□□□ -1.98
RPL38-205ENST00000530646 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
RPL38-205ENST00000530646 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms