RNA–Protein interactions for RNA: ENST00000530275.3

MACF1-230, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-230ENST00000530275 MT1AP04731 61 aa3.76□□□□□ -1.81
MACF1-230ENST00000530275 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
MACF1-230ENST00000530275 KMT2CQ8NEZ4 4911 aaKnown RBP3.75□□□□□ -1.81
MACF1-230ENST00000530275 PKHD1P08F94 4074 aa3.74□□□□□ -1.81
MACF1-230ENST00000530275 PCLOQ9Y6V0 5065 aa3.73□□□□□ -1.81
MACF1-230ENST00000530275 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
MACF1-230ENST00000530275 LRP2P98164 4655 aa3.7□□□□□ -1.82
MACF1-230ENST00000530275 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
MACF1-230ENST00000530275 KRTAP2-3P0C7H8 128 aa3.66□□□□□ -1.82
MACF1-230ENST00000530275 KRTAP2-4Q9BYR9 128 aa3.66□□□□□ -1.82
MACF1-230ENST00000530275 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
MACF1-230ENST00000530275 KRTAP4-9Q9BYQ8 210 aa3.65□□□□□ -1.82
MACF1-230ENST00000530275 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
MACF1-230ENST00000530275 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
MACF1-230ENST00000530275 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
MACF1-230ENST00000530275 LCE2AQ5TA79 106 aaPredicted RBP3.52□□□□□ -1.85
MACF1-230ENST00000530275 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
MACF1-230ENST00000530275 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
MACF1-230ENST00000530275 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
MACF1-230ENST00000530275 EPPK1P58107 5090 aaKnown RBP3.47□□□□□ -1.85
MACF1-230ENST00000530275 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.85
MACF1-230ENST00000530275 KRTAP6-3Q3LI67 103 aa3.45□□□□□ -1.86
MACF1-230ENST00000530275 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
MACF1-230ENST00000530275 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
MACF1-230ENST00000530275 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
MACF1-230ENST00000530275 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
MACF1-230ENST00000530275 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
MACF1-230ENST00000530275 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
MACF1-230ENST00000530275 RNF213Q63HN8 5207 aa3.32□□□□□ -1.88
MACF1-230ENST00000530275 SYNE2Q8WXH0 6885 aaKnown RBP3.32□□□□□ -1.88
MACF1-230ENST00000530275 HMCN2Q8NDA2 5059 aa3.31□□□□□ -1.88
MACF1-230ENST00000530275 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
MACF1-230ENST00000530275 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
MACF1-230ENST00000530275 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
MACF1-230ENST00000530275 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
MACF1-230ENST00000530275 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
MACF1-230ENST00000530275 UBR4Q5T4S7 5183 aa3.15□□□□□ -1.9
MACF1-230ENST00000530275 MUC2Q02817 5179 aa3.1□□□□□ -1.91
MACF1-230ENST00000530275 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
MACF1-230ENST00000530275 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
MACF1-230ENST00000530275 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
MACF1-230ENST00000530275 KRTAP4-11Q9BYQ6 195 aa2.92□□□□□ -1.94
MACF1-230ENST00000530275 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
MACF1-230ENST00000530275 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
MACF1-230ENST00000530275 NEBP20929 6669 aa2.78□□□□□ -1.96
MACF1-230ENST00000530275 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
MACF1-230ENST00000530275 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
MACF1-230ENST00000530275 USH2AO75445 5202 aa2.67□□□□□ -1.98
MACF1-230ENST00000530275 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
MACF1-230ENST00000530275 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
MACF1-230ENST00000530275 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
MACF1-230ENST00000530275 SSPOA2VEC9 5147 aa2.58□□□□□ -2
MACF1-230ENST00000530275 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
MACF1-230ENST00000530275 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
MACF1-230ENST00000530275 FCGBPQ9Y6R7 5405 aaPredicted RBP2.55□□□□□ -2
MACF1-230ENST00000530275 KMT2DO14686 5537 aa2.53□□□□□ -2
MACF1-230ENST00000530275 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
MACF1-230ENST00000530275 MUC12Q9UKN1 5478 aa2.34□□□□□ -2.03
MACF1-230ENST00000530275 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
MACF1-230ENST00000530275 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
MACF1-230ENST00000530275 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
MACF1-230ENST00000530275 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
MACF1-230ENST00000530275 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
MACF1-230ENST00000530275 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
MACF1-230ENST00000530275 PHGR1C9JFL3 82 aa2□□□□□ -2.09
MACF1-230ENST00000530275 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
MACF1-230ENST00000530275 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
MACF1-230ENST00000530275 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
MACF1-230ENST00000530275 MUC5BQ9HC84 5762 aaPredicted RBP1.82□□□□□ -2.12
MACF1-230ENST00000530275 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
MACF1-230ENST00000530275 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
MACF1-230ENST00000530275 KRTAP5-11Q6L8G4 156 aa1.77□□□□□ -2.13
MACF1-230ENST00000530275 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
MACF1-230ENST00000530275 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
MACF1-230ENST00000530275 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
MACF1-230ENST00000530275 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
MACF1-230ENST00000530275 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.2
MACF1-230ENST00000530275 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms