RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
CCDC90B-211ENST00000529073 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
CCDC90B-211ENST00000529073 A0A1B0GU69 56 aa4.43□□□□□ -1.7
CCDC90B-211ENST00000529073 PSPHP1O15172 72 aa4.43□□□□□ -1.7
CCDC90B-211ENST00000529073 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
CCDC90B-211ENST00000529073 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
CCDC90B-211ENST00000529073 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
CCDC90B-211ENST00000529073 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
CCDC90B-211ENST00000529073 PRR15LQ9BU68 103 aa4.36□□□□□ -1.71
CCDC90B-211ENST00000529073 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
CCDC90B-211ENST00000529073 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
CCDC90B-211ENST00000529073 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
CCDC90B-211ENST00000529073 SPRR2DP22532 72 aa4.31□□□□□ -1.72
CCDC90B-211ENST00000529073 A6NED7 52 aa4.3□□□□□ -1.72
CCDC90B-211ENST00000529073 KRTAP2-3P0C7H8 128 aa4.28□□□□□ -1.72
CCDC90B-211ENST00000529073 KRTAP2-4Q9BYR9 128 aa4.28□□□□□ -1.72
CCDC90B-211ENST00000529073 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
CCDC90B-211ENST00000529073 MT1EP04732 61 aa4.26□□□□□ -1.73
CCDC90B-211ENST00000529073 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
CCDC90B-211ENST00000529073 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
CCDC90B-211ENST00000529073 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
CCDC90B-211ENST00000529073 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
CCDC90B-211ENST00000529073 UQCR11O14957 56 aa4.14□□□□□ -1.75
CCDC90B-211ENST00000529073 KRTAP2-1Q9BYU5 128 aa4.14□□□□□ -1.75
CCDC90B-211ENST00000529073 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
CCDC90B-211ENST00000529073 TNP1P09430 55 aa4.09□□□□□ -1.75
CCDC90B-211ENST00000529073 MT1LQ93083 61 aa4.09□□□□□ -1.75
CCDC90B-211ENST00000529073 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
CCDC90B-211ENST00000529073 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
CCDC90B-211ENST00000529073 MT3P25713 68 aa4.07□□□□□ -1.76
CCDC90B-211ENST00000529073 MT1MQ8N339 61 aa4.05□□□□□ -1.76
CCDC90B-211ENST00000529073 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
CCDC90B-211ENST00000529073 MT1GP13640 62 aa4□□□□□ -1.77
CCDC90B-211ENST00000529073 KRTAP12-3P60328 96 aa3.96□□□□□ -1.78
CCDC90B-211ENST00000529073 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
CCDC90B-211ENST00000529073 KRTAP25-1Q3LHN0 102 aa3.9□□□□□ -1.79
CCDC90B-211ENST00000529073 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
CCDC90B-211ENST00000529073 K7ERS5 55 aa3.86□□□□□ -1.79
CCDC90B-211ENST00000529073 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
CCDC90B-211ENST00000529073 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
CCDC90B-211ENST00000529073 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
CCDC90B-211ENST00000529073 ROMO1P60602 79 aa3.82□□□□□ -1.8
CCDC90B-211ENST00000529073 MT4P47944 62 aa3.81□□□□□ -1.8
CCDC90B-211ENST00000529073 HMCN1Q96RW7 5635 aa3.78□□□□□ -1.8
CCDC90B-211ENST00000529073 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
CCDC90B-211ENST00000529073 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
CCDC90B-211ENST00000529073 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
CCDC90B-211ENST00000529073 AHNAK2Q8IVF2 5795 aa3.67□□□□□ -1.82
CCDC90B-211ENST00000529073 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
CCDC90B-211ENST00000529073 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
CCDC90B-211ENST00000529073 SYNE1Q8NF91 8797 aaKnown RBP3.55□□□□□ -1.84
CCDC90B-211ENST00000529073 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
CCDC90B-211ENST00000529073 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CCDC90B-211ENST00000529073 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
CCDC90B-211ENST00000529073 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
CCDC90B-211ENST00000529073 MT1AP04731 61 aa3.44□□□□□ -1.86
CCDC90B-211ENST00000529073 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
CCDC90B-211ENST00000529073 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CCDC90B-211ENST00000529073 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
CCDC90B-211ENST00000529073 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
CCDC90B-211ENST00000529073 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
CCDC90B-211ENST00000529073 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
CCDC90B-211ENST00000529073 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
CCDC90B-211ENST00000529073 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
CCDC90B-211ENST00000529073 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
CCDC90B-211ENST00000529073 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
CCDC90B-211ENST00000529073 INE1O15225 51 aa2.94□□□□□ -1.94
CCDC90B-211ENST00000529073 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
CCDC90B-211ENST00000529073 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
CCDC90B-211ENST00000529073 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CCDC90B-211ENST00000529073 LCE3DQ9BYE3 92 aa2.62□□□□□ -1.99
CCDC90B-211ENST00000529073 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
CCDC90B-211ENST00000529073 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
CCDC90B-211ENST00000529073 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
CCDC90B-211ENST00000529073 PRM1P04553 51 aa2□□□□□ -2.09
CCDC90B-211ENST00000529073 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CCDC90B-211ENST00000529073 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 70.8 ms