RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
USP35-202ENST00000528910 TNP1P09430 55 aa6.35□□□□□ -1.39
USP35-202ENST00000528910 BRK1Q8WUW1 75 aa6.33□□□□□ -1.4
USP35-202ENST00000528910 LCE3AQ5TA76 89 aa6.29□□□□□ -1.4
USP35-202ENST00000528910 MT1GP13640 62 aa6.24□□□□□ -1.41
USP35-202ENST00000528910 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
USP35-202ENST00000528910 MT1LQ93083 61 aa6.2□□□□□ -1.42
USP35-202ENST00000528910 DSTQ03001 7570 aaKnown RBP6.19□□□□□ -1.42
USP35-202ENST00000528910 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
USP35-202ENST00000528910 MT1MQ8N339 61 aa6.15□□□□□ -1.42
USP35-202ENST00000528910 KRTAP25-1Q3LHN0 102 aa6.08□□□□□ -1.44
USP35-202ENST00000528910 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
USP35-202ENST00000528910 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
USP35-202ENST00000528910 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
USP35-202ENST00000528910 ROMO1P60602 79 aa5.96□□□□□ -1.46
USP35-202ENST00000528910 KRTAP4-3Q9BYR4 195 aa5.96□□□□□ -1.46
USP35-202ENST00000528910 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
USP35-202ENST00000528910 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
USP35-202ENST00000528910 LCE4AQ5TA78 99 aa5.87□□□□□ -1.47
USP35-202ENST00000528910 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
USP35-202ENST00000528910 KRTAP5-4Q6L8H1 288 aa5.82□□□□□ -1.48
USP35-202ENST00000528910 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
USP35-202ENST00000528910 MT4P47944 62 aa5.8□□□□□ -1.48
USP35-202ENST00000528910 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
USP35-202ENST00000528910 KTN1-AS1Q86SY8 53 aa5.75□□□□□ -1.49
USP35-202ENST00000528910 HMCN1Q96RW7 5635 aa5.73□□□□□ -1.49
USP35-202ENST00000528910 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
USP35-202ENST00000528910 KRTAP5-5Q701N2 237 aaPredicted RBP5.66□□□□□ -1.5
USP35-202ENST00000528910 KRTAP4-6Q9BYQ5 205 aa5.66□□□□□ -1.5
USP35-202ENST00000528910 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
USP35-202ENST00000528910 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
USP35-202ENST00000528910 AHNAK2Q8IVF2 5795 aa5.54□□□□□ -1.52
USP35-202ENST00000528910 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
USP35-202ENST00000528910 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
USP35-202ENST00000528910 KRTAP20-2Q3LI61 65 aa5.46□□□□□ -1.54
USP35-202ENST00000528910 SYNE1Q8NF91 8797 aaKnown RBP5.46□□□□□ -1.54
USP35-202ENST00000528910 KRTAP5-10Q6L8G5 202 aa5.45□□□□□ -1.54
USP35-202ENST00000528910 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
USP35-202ENST00000528910 SVIPQ8NHG7 77 aa5.37□□□□□ -1.55
USP35-202ENST00000528910 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
USP35-202ENST00000528910 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
USP35-202ENST00000528910 MT1AP04731 61 aa5.29□□□□□ -1.56
USP35-202ENST00000528910 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
USP35-202ENST00000528910 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
USP35-202ENST00000528910 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
USP35-202ENST00000528910 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
USP35-202ENST00000528910 KRTAP6-2Q3LI66 62 aa4.96□□□□□ -1.62
USP35-202ENST00000528910 H3BS24 57 aa4.95□□□□□ -1.62
USP35-202ENST00000528910 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
USP35-202ENST00000528910 MT3P25713 68 aa4.8□□□□□ -1.64
USP35-202ENST00000528910 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
USP35-202ENST00000528910 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
USP35-202ENST00000528910 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
USP35-202ENST00000528910 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
USP35-202ENST00000528910 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
USP35-202ENST00000528910 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
USP35-202ENST00000528910 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
USP35-202ENST00000528910 KRTAP9-9Q9BYP9 154 aa4.49□□□□□ -1.69
USP35-202ENST00000528910 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
USP35-202ENST00000528910 NDUFAF8A1L188 74 aa4.37□□□□□ -1.71
USP35-202ENST00000528910 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
USP35-202ENST00000528910 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
USP35-202ENST00000528910 LCE1BQ5T7P3 118 aa4.09□□□□□ -1.75
USP35-202ENST00000528910 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
USP35-202ENST00000528910 A0A0A0MQY5 61 aa4□□□□□ -1.77
USP35-202ENST00000528910 LCE3EQ5T5B0 92 aa3.82□□□□□ -1.8
USP35-202ENST00000528910 INE1O15225 51 aa3.79□□□□□ -1.8
USP35-202ENST00000528910 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
USP35-202ENST00000528910 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
USP35-202ENST00000528910 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
USP35-202ENST00000528910 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
USP35-202ENST00000528910 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
USP35-202ENST00000528910 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
USP35-202ENST00000528910 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
USP35-202ENST00000528910 PRM1P04553 51 aa3.02□□□□□ -1.93
USP35-202ENST00000528910 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
USP35-202ENST00000528910 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
USP35-202ENST00000528910 MUC16Q8WXI7 14507 aa2.14□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 131.5 ms