RNA–Protein interactions for RNA: ENST00000528846.5

COLCA2-203, Transcript of colorectal cancer associated 2, humanhuman

TSL 3

Gene COLCA2, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-203ENST00000528846 KRTAP19-3Q7Z4W3 81 aa7.32□□□□□ -1.24
COLCA2-203ENST00000528846 DSTQ03001 7570 aaKnown RBP7.3□□□□□ -1.24
COLCA2-203ENST00000528846 KRTAP4-9Q9BYQ8 210 aa7.23□□□□□ -1.25
COLCA2-203ENST00000528846 KRTAP25-1Q3LHN0 102 aa7.22□□□□□ -1.25
COLCA2-203ENST00000528846 LCE3AQ5TA76 89 aa7.18□□□□□ -1.26
COLCA2-203ENST00000528846 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
COLCA2-203ENST00000528846 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
COLCA2-203ENST00000528846 MT1GP13640 62 aa7.13□□□□□ -1.27
COLCA2-203ENST00000528846 ROMO1P60602 79 aa7.1□□□□□ -1.27
COLCA2-203ENST00000528846 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
COLCA2-203ENST00000528846 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
COLCA2-203ENST00000528846 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
COLCA2-203ENST00000528846 KRTAP23-1A1A580 65 aa7.01□□□□□ -1.29
COLCA2-203ENST00000528846 MT1MQ8N339 61 aa7□□□□□ -1.29
COLCA2-203ENST00000528846 MT1LQ93083 61 aa6.98□□□□□ -1.29
COLCA2-203ENST00000528846 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
COLCA2-203ENST00000528846 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
COLCA2-203ENST00000528846 MT4P47944 62 aa6.93□□□□□ -1.3
COLCA2-203ENST00000528846 KRTAP4-3Q9BYR4 195 aa6.87□□□□□ -1.31
COLCA2-203ENST00000528846 HMCN1Q96RW7 5635 aa6.85□□□□□ -1.31
COLCA2-203ENST00000528846 SVIPQ8NHG7 77 aa6.82□□□□□ -1.32
COLCA2-203ENST00000528846 PRO0628Q9UI54 55 aa6.8□□□□□ -1.32
COLCA2-203ENST00000528846 KRTAP5-4Q6L8H1 288 aa6.77□□□□□ -1.33
COLCA2-203ENST00000528846 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
COLCA2-203ENST00000528846 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
COLCA2-203ENST00000528846 KRTAP4-7Q9BYR0 210 aa6.66□□□□□ -1.34
COLCA2-203ENST00000528846 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
COLCA2-203ENST00000528846 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
COLCA2-203ENST00000528846 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
COLCA2-203ENST00000528846 KRTAP5-10Q6L8G5 202 aa6.6□□□□□ -1.35
COLCA2-203ENST00000528846 LCE3CQ5T5A8 94 aa6.43□□□□□ -1.38
COLCA2-203ENST00000528846 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
COLCA2-203ENST00000528846 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
COLCA2-203ENST00000528846 KRTAP5-5Q701N2 237 aaPredicted RBP6.42□□□□□ -1.38
COLCA2-203ENST00000528846 KRTAP5-7Q6L8G8 165 aa6.37□□□□□ -1.39
COLCA2-203ENST00000528846 SPRR5A0A1B0GTR4 108 aa6.36□□□□□ -1.39
COLCA2-203ENST00000528846 KRTAP12-4P60329 112 aa6.34□□□□□ -1.39
COLCA2-203ENST00000528846 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
COLCA2-203ENST00000528846 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
COLCA2-203ENST00000528846 KTN1-AS1Q86SY8 53 aa6.24□□□□□ -1.41
COLCA2-203ENST00000528846 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
COLCA2-203ENST00000528846 KRTAP9-6A8MVA2 160 aa6.01□□□□□ -1.45
COLCA2-203ENST00000528846 MT1AP04731 61 aa5.93□□□□□ -1.46
COLCA2-203ENST00000528846 KRTAP6-1Q3LI64 71 aa5.92□□□□□ -1.46
COLCA2-203ENST00000528846 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
COLCA2-203ENST00000528846 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
COLCA2-203ENST00000528846 KRTAP9-4Q9BYQ2 154 aa5.78□□□□□ -1.48
COLCA2-203ENST00000528846 KRTAP5-8O75690 187 aa5.71□□□□□ -1.5
COLCA2-203ENST00000528846 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
COLCA2-203ENST00000528846 OBSCNQ5VST9 7968 aa5.58□□□□□ -1.52
COLCA2-203ENST00000528846 MUC5ACP98088 5654 aa5.49□□□□□ -1.53
COLCA2-203ENST00000528846 MUC5BQ9HC84 5762 aaPredicted RBP5.49□□□□□ -1.53
COLCA2-203ENST00000528846 AHNAKQ09666 5890 aaKnown RBP5.47□□□□□ -1.53
COLCA2-203ENST00000528846 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
COLCA2-203ENST00000528846 MT3P25713 68 aa5.45□□□□□ -1.54
COLCA2-203ENST00000528846 KRTAP5-1Q6L8H4 278 aa5.33□□□□□ -1.56
COLCA2-203ENST00000528846 LUZP6Q538Z0 58 aa5.28□□□□□ -1.56
COLCA2-203ENST00000528846 H3BS24 57 aa5.2□□□□□ -1.58
COLCA2-203ENST00000528846 LCE1EQ5T753 118 aa5.04□□□□□ -1.6
COLCA2-203ENST00000528846 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
COLCA2-203ENST00000528846 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
COLCA2-203ENST00000528846 KRTAP4-2Q9BYR5 136 aa4.78□□□□□ -1.64
COLCA2-203ENST00000528846 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
COLCA2-203ENST00000528846 LCE1CQ5T751 118 aa4.68□□□□□ -1.66
COLCA2-203ENST00000528846 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
COLCA2-203ENST00000528846 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
COLCA2-203ENST00000528846 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
COLCA2-203ENST00000528846 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
COLCA2-203ENST00000528846 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
COLCA2-203ENST00000528846 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
COLCA2-203ENST00000528846 INE1O15225 51 aa4.14□□□□□ -1.75
COLCA2-203ENST00000528846 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
COLCA2-203ENST00000528846 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
COLCA2-203ENST00000528846 PRM1P04553 51 aa3.64□□□□□ -1.83
COLCA2-203ENST00000528846 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
COLCA2-203ENST00000528846 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
COLCA2-203ENST00000528846 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
COLCA2-203ENST00000528846 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 70.7 ms