RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 KRTAP10-12P60413 245 aa2.5□□□□□ -2.01
MACF1-228ENST00000528611 TNP1P09430 55 aa2.49□□□□□ -2.01
MACF1-228ENST00000528611 KRTAP25-1Q3LHN0 102 aa2.48□□□□□ -2.01
MACF1-228ENST00000528611 BRK1Q8WUW1 75 aa2.46□□□□□ -2.02
MACF1-228ENST00000528611 C10orf95Q9H7T3 257 aa2.46□□□□□ -2.02
MACF1-228ENST00000528611 MACF1Q9UPN3 7388 aaKnown RBP2.45□□□□□ -2.02
MACF1-228ENST00000528611 ROMO1P60602 79 aa2.44□□□□□ -2.02
MACF1-228ENST00000528611 KRTAP6-3Q3LI67 103 aa2.44□□□□□ -2.02
MACF1-228ENST00000528611 KRTAP8-1Q8IUC2 63 aa2.41□□□□□ -2.02
MACF1-228ENST00000528611 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
MACF1-228ENST00000528611 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
MACF1-228ENST00000528611 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
MACF1-228ENST00000528611 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
MACF1-228ENST00000528611 LCE3AQ5TA76 89 aa2.32□□□□□ -2.04
MACF1-228ENST00000528611 SPRR2FQ96RM1 72 aa2.32□□□□□ -2.04
MACF1-228ENST00000528611 KRTAP9-6A8MVA2 160 aa2.31□□□□□ -2.04
MACF1-228ENST00000528611 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
MACF1-228ENST00000528611 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
MACF1-228ENST00000528611 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
MACF1-228ENST00000528611 MT1EP04732 61 aa2.28□□□□□ -2.04
MACF1-228ENST00000528611 KRTAP19-5Q3LI72 72 aa2.28□□□□□ -2.04
MACF1-228ENST00000528611 KMT2DO14686 5537 aa2.27□□□□□ -2.05
MACF1-228ENST00000528611 MT1GP13640 62 aa2.26□□□□□ -2.05
MACF1-228ENST00000528611 MT3P25713 68 aa2.26□□□□□ -2.05
MACF1-228ENST00000528611 KRTAP19-3Q7Z4W3 81 aa2.25□□□□□ -2.05
MACF1-228ENST00000528611 SPRR2EP22531 72 aa2.24□□□□□ -2.05
MACF1-228ENST00000528611 SPRR2BP35325 72 aa2.24□□□□□ -2.05
MACF1-228ENST00000528611 SPRR2AP35326 72 aa2.24□□□□□ -2.05
MACF1-228ENST00000528611 KTN1-AS1Q86SY8 53 aa2.23□□□□□ -2.05
MACF1-228ENST00000528611 MT1LQ93083 61 aa2.21□□□□□ -2.06
MACF1-228ENST00000528611 KRTAP4-3Q9BYR4 195 aa2.2□□□□□ -2.06
MACF1-228ENST00000528611 NEBP20929 6669 aa2.19□□□□□ -2.06
MACF1-228ENST00000528611 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
MACF1-228ENST00000528611 SPRR2DP22532 72 aa2.17□□□□□ -2.06
MACF1-228ENST00000528611 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
MACF1-228ENST00000528611 MDN1Q9NU22 5596 aa2.17□□□□□ -2.06
MACF1-228ENST00000528611 KRTAP2-3P0C7H8 128 aa2.16□□□□□ -2.06
MACF1-228ENST00000528611 MT1MQ8N339 61 aa2.16□□□□□ -2.06
MACF1-228ENST00000528611 KRTAP2-4Q9BYR9 128 aa2.16□□□□□ -2.06
MACF1-228ENST00000528611 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
MACF1-228ENST00000528611 KRTAP20-1Q3LI63 56 aa2.12□□□□□ -2.07
MACF1-228ENST00000528611 PRAC1Q96KF2 57 aa2.11□□□□□ -2.07
MACF1-228ENST00000528611 KRTAP2-1Q9BYU5 128 aa2.11□□□□□ -2.07
MACF1-228ENST00000528611 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
MACF1-228ENST00000528611 SVIPQ8NHG7 77 aa2.03□□□□□ -2.08
MACF1-228ENST00000528611 SPRR5A0A1B0GTR4 108 aa2.01□□□□□ -2.09
MACF1-228ENST00000528611 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
MACF1-228ENST00000528611 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
MACF1-228ENST00000528611 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
MACF1-228ENST00000528611 MT1AP04731 61 aa1.91□□□□□ -2.1
MACF1-228ENST00000528611 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
MACF1-228ENST00000528611 A0A0A0MQY5 61 aa1.88□□□□□ -2.11
MACF1-228ENST00000528611 SYNE1Q8NF91 8797 aaKnown RBP1.85□□□□□ -2.11
MACF1-228ENST00000528611 KRTAP6-1Q3LI64 71 aa1.84□□□□□ -2.11
MACF1-228ENST00000528611 KRTAP5-8O75690 187 aa1.83□□□□□ -2.12
MACF1-228ENST00000528611 MT4P47944 62 aa1.83□□□□□ -2.12
MACF1-228ENST00000528611 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
MACF1-228ENST00000528611 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
MACF1-228ENST00000528611 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
MACF1-228ENST00000528611 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
MACF1-228ENST00000528611 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
MACF1-228ENST00000528611 LCE3EQ5T5B0 92 aa1.69□□□□□ -2.14
MACF1-228ENST00000528611 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
MACF1-228ENST00000528611 NDUFAF8A1L188 74 aa1.64□□□□□ -2.15
MACF1-228ENST00000528611 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
MACF1-228ENST00000528611 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.15
MACF1-228ENST00000528611 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
MACF1-228ENST00000528611 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
MACF1-228ENST00000528611 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
MACF1-228ENST00000528611 INE1O15225 51 aa1.48□□□□□ -2.17
MACF1-228ENST00000528611 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
MACF1-228ENST00000528611 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
MACF1-228ENST00000528611 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
MACF1-228ENST00000528611 AHNAKQ09666 5890 aaKnown RBP1.24□□□□□ -2.21
MACF1-228ENST00000528611 PRM1P04553 51 aa1.21□□□□□ -2.22
MACF1-228ENST00000528611 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
MACF1-228ENST00000528611 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
MACF1-228ENST00000528611 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms