RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	KRTAP2-1	Q9BYU5	128 aa		8.06	□□□□□ -1.12
GSDMD-208	ENST00000528475	FSIP2	Q5CZC0	6907 aa		8.02	□□□□□ -1.13
GSDMD-208	ENST00000528475	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	7.81	□□□□□ -1.16
GSDMD-208	ENST00000528475	KRTAP9-2	Q9BYQ4	174 aa		7.77	□□□□□ -1.17
GSDMD-208	ENST00000528475	KRTAP19-3	Q7Z4W3	81 aa		7.58	□□□□□ -1.2
GSDMD-208	ENST00000528475	MT1G	P13640	62 aa		7.58	□□□□□ -1.2
GSDMD-208	ENST00000528475	MT1M	Q8N339	61 aa		7.58	□□□□□ -1.2
GSDMD-208	ENST00000528475	KRTAP4-3	Q9BYR4	195 aa		7.55	□□□□□ -1.2
GSDMD-208	ENST00000528475	CRCT1	Q9UGL9	99 aa		7.55	□□□□□ -1.2
GSDMD-208	ENST00000528475	LOC100996750	A0A140TA64	210 aa		7.53	□□□□□ -1.2
GSDMD-208	ENST00000528475	KRTAP9-6	A0A140TA67	174 aa		7.48	□□□□□ -1.21
GSDMD-208	ENST00000528475	MACF1	Q9UPN3	7388 aa	Known RBP	7.39	□□□□□ -1.23
GSDMD-208	ENST00000528475	SPRR2F	Q96RM1	72 aa		7.38	□□□□□ -1.23
GSDMD-208	ENST00000528475	LCE5A	Q5TCM9	118 aa		7.32	□□□□□ -1.24
GSDMD-208	ENST00000528475	MUC12	Q9UKN1	5478 aa		7.3	□□□□□ -1.24
GSDMD-208	ENST00000528475	KRTAP5-9	P26371	169 aa		7.16	□□□□□ -1.26
GSDMD-208	ENST00000528475	SYNE2	Q8WXH0	6885 aa	Known RBP	7.14	□□□□□ -1.27
GSDMD-208	ENST00000528475	KRTAP12-4	P60329	112 aa		7.04	□□□□□ -1.28
GSDMD-208	ENST00000528475	LCE1A	Q5T7P2	110 aa		7.01	□□□□□ -1.29
GSDMD-208	ENST00000528475	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.97	□□□□□ -1.29
GSDMD-208	ENST00000528475	SPRR2E	P22531	72 aa		6.92	□□□□□ -1.3
GSDMD-208	ENST00000528475	SPRR2B	P35325	72 aa		6.92	□□□□□ -1.3
GSDMD-208	ENST00000528475	SPRR2A	P35326	72 aa		6.92	□□□□□ -1.3
GSDMD-208	ENST00000528475	LCE3B	Q5TA77	95 aa		6.92	□□□□□ -1.3
GSDMD-208	ENST00000528475	MT1A	P04731	61 aa		6.9	□□□□□ -1.3
GSDMD-208	ENST00000528475	KRTAP6-3	Q3LI67	103 aa		6.9	□□□□□ -1.3
GSDMD-208	ENST00000528475	MDN1	Q9NU22	5596 aa		6.9	□□□□□ -1.31
GSDMD-208	ENST00000528475	KRTAP6-1	Q3LI64	71 aa		6.85	□□□□□ -1.31
GSDMD-208	ENST00000528475	DST	Q03001	7570 aa	Known RBP	6.79	□□□□□ -1.32
GSDMD-208	ENST00000528475	KRTAP4-9	Q9BYQ8	210 aa		6.74	□□□□□ -1.33
GSDMD-208	ENST00000528475	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.73	□□□□□ -1.33
GSDMD-208	ENST00000528475	KRTAP9-7	A8MTY7	169 aa		6.7	□□□□□ -1.34
GSDMD-208	ENST00000528475	SPRR2D	P22532	72 aa		6.65	□□□□□ -1.34
GSDMD-208	ENST00000528475	LCE3D	Q9BYE3	92 aa		6.62	□□□□□ -1.35
GSDMD-208	ENST00000528475	SYNE1	Q8NF91	8797 aa	Known RBP	6.55	□□□□□ -1.36
GSDMD-208	ENST00000528475	LCE3E	Q5T5B0	92 aa		6.55	□□□□□ -1.36
GSDMD-208	ENST00000528475	KRTAP9-4	Q9BYQ2	154 aa		6.43	□□□□□ -1.38
GSDMD-208	ENST00000528475	NEB	P20929	6669 aa		6.35	□□□□□ -1.39
GSDMD-208	ENST00000528475	PRM1	P04553	51 aa		6.22	□□□□□ -1.41
GSDMD-208	ENST00000528475	MT3	P25713	68 aa		6.14	□□□□□ -1.43
GSDMD-208	ENST00000528475	KRTAP6-2	Q3LI66	62 aa		6.11	□□□□□ -1.43
GSDMD-208	ENST00000528475	KRTAP5-4	Q6L8H1	288 aa		6.06	□□□□□ -1.44
GSDMD-208	ENST00000528475	LCE4A	Q5TA78	99 aa		5.87	□□□□□ -1.47
GSDMD-208	ENST00000528475	KRTAP2-2	Q9BYT5	123 aa		5.87	□□□□□ -1.47
GSDMD-208	ENST00000528475	KRTAP20-1	Q3LI63	56 aa		5.82	□□□□□ -1.48
GSDMD-208	ENST00000528475	MT4	P47944	62 aa		5.79	□□□□□ -1.48
GSDMD-208	ENST00000528475	KRTAP4-6	Q9BYQ5	205 aa		5.79	□□□□□ -1.48
GSDMD-208	ENST00000528475	KRTAP20-2	Q3LI61	65 aa		5.68	□□□□□ -1.5
GSDMD-208	ENST00000528475	LCE1D	Q5T752	114 aa		5.62	□□□□□ -1.51
GSDMD-208	ENST00000528475	OBSCN	Q5VST9	7968 aa		5.6	□□□□□ -1.51
GSDMD-208	ENST00000528475	KRTAP5-2	Q701N4	177 aa		5.55	□□□□□ -1.52
GSDMD-208	ENST00000528475	HMCN1	Q96RW7	5635 aa		5.52	□□□□□ -1.53
GSDMD-208	ENST00000528475	KRTAP5-3	Q6L8H2	238 aa		5.45	□□□□□ -1.54
GSDMD-208	ENST00000528475	GPR98	Q8WXG9	6306 aa		5.13	□□□□□ -1.59
GSDMD-208	ENST00000528475	LCE1E	Q5T753	118 aa		5.07	□□□□□ -1.6
GSDMD-208	ENST00000528475	MUC5AC	P98088	5654 aa		5.05	□□□□□ -1.6
GSDMD-208	ENST00000528475	KRTAP5-10	Q6L8G5	202 aa		4.86	□□□□□ -1.63
GSDMD-208	ENST00000528475	KRTAP5-1	Q6L8H4	278 aa		4.84	□□□□□ -1.63
GSDMD-208	ENST00000528475	KRTAP4-11	Q9BYQ6	195 aa		4.84	□□□□□ -1.63
GSDMD-208	ENST00000528475	LCE1B	Q5T7P3	118 aa		4.84	□□□□□ -1.64
GSDMD-208	ENST00000528475	LCE1C	Q5T751	118 aa		4.76	□□□□□ -1.65
GSDMD-208	ENST00000528475	KRTAP4-2	Q9BYR5	136 aa		4.74	□□□□□ -1.65
GSDMD-208	ENST00000528475	AHNAK2	Q8IVF2	5795 aa		4.73	□□□□□ -1.65
GSDMD-208	ENST00000528475	KRTAP5-8	O75690	187 aa		4.65	□□□□□ -1.66
GSDMD-208	ENST00000528475	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.55	□□□□□ -1.68
GSDMD-208	ENST00000528475	KRTAP5-7	Q6L8G8	165 aa		4.54	□□□□□ -1.68
GSDMD-208	ENST00000528475	KRTAP21-2	Q3LI59	83 aa		4.45	□□□□□ -1.7
GSDMD-208	ENST00000528475	LCE1F	Q5T754	118 aa		4.34	□□□□□ -1.71
GSDMD-208	ENST00000528475	KRTAP9-9	Q9BYP9	154 aa		4.12	□□□□□ -1.75
GSDMD-208	ENST00000528475	KRTAP5-11	Q6L8G4	156 aa		4.1	□□□□□ -1.75
GSDMD-208	ENST00000528475	KRTAP21-1	Q3LI58	79 aa		3.99	□□□□□ -1.77
GSDMD-208	ENST00000528475	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.94	□□□□□ -1.78
GSDMD-208	ENST00000528475	KRTAP4-4	Q9BYR3	166 aa		3.93	□□□□□ -1.78
GSDMD-208	ENST00000528475	AHNAK	Q09666	5890 aa	Known RBP	3.89	□□□□□ -1.79
GSDMD-208	ENST00000528475	KRTAP4-12	Q9BQ66	201 aa		3.84	□□□□□ -1.79
GSDMD-208	ENST00000528475	MUC19	Q7Z5P9	8384 aa		3.55	□□□□□ -1.84
GSDMD-208	ENST00000528475	PHGR1	C9JFL3	82 aa		3.52	□□□□□ -1.85
GSDMD-208	ENST00000528475	MUC16	Q8WXI7	14507 aa		2.38	□□□□□ -2.03

Retrieved 78 of 20,778 RNA–protein pairs in 9.8 ms