RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 MACF1Q9UPN3 7388 aaKnown RBP4.7□□□□□ -1.66
SEC16B-208ENST00000528461 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
SEC16B-208ENST00000528461 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
SEC16B-208ENST00000528461 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
SEC16B-208ENST00000528461 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
SEC16B-208ENST00000528461 SYNE2Q8WXH0 6885 aaKnown RBP4.55□□□□□ -1.68
SEC16B-208ENST00000528461 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
SEC16B-208ENST00000528461 MT1MQ8N339 61 aa4.54□□□□□ -1.68
SEC16B-208ENST00000528461 MT1GP13640 62 aa4.54□□□□□ -1.68
SEC16B-208ENST00000528461 SPRR2FQ96RM1 72 aa4.52□□□□□ -1.69
SEC16B-208ENST00000528461 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
SEC16B-208ENST00000528461 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
SEC16B-208ENST00000528461 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
SEC16B-208ENST00000528461 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
SEC16B-208ENST00000528461 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
SEC16B-208ENST00000528461 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
SEC16B-208ENST00000528461 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
SEC16B-208ENST00000528461 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SEC16B-208ENST00000528461 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SEC16B-208ENST00000528461 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.25□□□□□ -1.73
SEC16B-208ENST00000528461 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
SEC16B-208ENST00000528461 SPRR2EP22531 72 aa4.21□□□□□ -1.74
SEC16B-208ENST00000528461 SPRR2BP35325 72 aa4.21□□□□□ -1.74
SEC16B-208ENST00000528461 SPRR2AP35326 72 aa4.21□□□□□ -1.74
SEC16B-208ENST00000528461 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
SEC16B-208ENST00000528461 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
SEC16B-208ENST00000528461 KRTAP6-1Q3LI64 71 aa4.06□□□□□ -1.76
SEC16B-208ENST00000528461 SPRR2DP22532 72 aa4.04□□□□□ -1.76
SEC16B-208ENST00000528461 MT1AP04731 61 aa4.03□□□□□ -1.77
SEC16B-208ENST00000528461 NEBP20929 6669 aa3.98□□□□□ -1.77
SEC16B-208ENST00000528461 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SEC16B-208ENST00000528461 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
SEC16B-208ENST00000528461 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.78
SEC16B-208ENST00000528461 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
SEC16B-208ENST00000528461 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
SEC16B-208ENST00000528461 KRTAP5-4Q6L8H1 288 aa3.79□□□□□ -1.8
SEC16B-208ENST00000528461 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
SEC16B-208ENST00000528461 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
SEC16B-208ENST00000528461 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
SEC16B-208ENST00000528461 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
SEC16B-208ENST00000528461 MT3P25713 68 aa3.6□□□□□ -1.83
SEC16B-208ENST00000528461 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
SEC16B-208ENST00000528461 LCE3EQ5T5B0 92 aa3.56□□□□□ -1.84
SEC16B-208ENST00000528461 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
SEC16B-208ENST00000528461 MT4P47944 62 aa3.53□□□□□ -1.84
SEC16B-208ENST00000528461 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
SEC16B-208ENST00000528461 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
SEC16B-208ENST00000528461 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
SEC16B-208ENST00000528461 LCE1DQ5T752 114 aa3.46□□□□□ -1.86
SEC16B-208ENST00000528461 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
SEC16B-208ENST00000528461 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
SEC16B-208ENST00000528461 KRTAP5-3Q6L8H2 238 aa3.41□□□□□ -1.86
SEC16B-208ENST00000528461 PRM1P04553 51 aa3.4□□□□□ -1.86
SEC16B-208ENST00000528461 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
SEC16B-208ENST00000528461 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
SEC16B-208ENST00000528461 LCE1EQ5T753 118 aa3.09□□□□□ -1.92
SEC16B-208ENST00000528461 MUC5ACP98088 5654 aa3.04□□□□□ -1.92
SEC16B-208ENST00000528461 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
SEC16B-208ENST00000528461 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
SEC16B-208ENST00000528461 KRTAP5-10Q6L8G5 202 aa2.97□□□□□ -1.93
SEC16B-208ENST00000528461 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
SEC16B-208ENST00000528461 AHNAK2Q8IVF2 5795 aa2.96□□□□□ -1.94
SEC16B-208ENST00000528461 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
SEC16B-208ENST00000528461 LCE1CQ5T751 118 aa2.9□□□□□ -1.94
SEC16B-208ENST00000528461 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.94
SEC16B-208ENST00000528461 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
SEC16B-208ENST00000528461 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
SEC16B-208ENST00000528461 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
SEC16B-208ENST00000528461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SEC16B-208ENST00000528461 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
SEC16B-208ENST00000528461 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
SEC16B-208ENST00000528461 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
SEC16B-208ENST00000528461 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
SEC16B-208ENST00000528461 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
SEC16B-208ENST00000528461 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
SEC16B-208ENST00000528461 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
SEC16B-208ENST00000528461 KRTAP21-1Q3LI58 79 aa2.18□□□□□ -2.06
SEC16B-208ENST00000528461 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 131.9 ms