RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
C11orf54-207ENST00000528288 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
C11orf54-207ENST00000528288 KRTAP4-2Q9BYR5 136 aa2.68□□□□□ -1.98
C11orf54-207ENST00000528288 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
C11orf54-207ENST00000528288 KRTAP4-9Q9BYQ8 210 aa2.68□□□□□ -1.98
C11orf54-207ENST00000528288 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.98
C11orf54-207ENST00000528288 LCE1DQ5T752 114 aa2.65□□□□□ -1.99
C11orf54-207ENST00000528288 KRTAP19-4Q3LI73 84 aa2.63□□□□□ -1.99
C11orf54-207ENST00000528288 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
C11orf54-207ENST00000528288 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
C11orf54-207ENST00000528288 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
C11orf54-207ENST00000528288 FCGBPQ9Y6R7 5405 aaPredicted RBP2.59□□□□□ -1.99
C11orf54-207ENST00000528288 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
C11orf54-207ENST00000528288 INE1O15225 51 aa2.57□□□□□ -2
C11orf54-207ENST00000528288 MT1LQ93083 61 aa2.57□□□□□ -2
C11orf54-207ENST00000528288 MT1EP04732 61 aa2.57□□□□□ -2
C11orf54-207ENST00000528288 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
C11orf54-207ENST00000528288 CRCT1Q9UGL9 99 aa2.52□□□□□ -2.01
C11orf54-207ENST00000528288 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
C11orf54-207ENST00000528288 MT1GP13640 62 aa2.48□□□□□ -2.01
C11orf54-207ENST00000528288 KRTAP2-3P0C7H8 128 aa2.48□□□□□ -2.01
C11orf54-207ENST00000528288 KRTAP2-4Q9BYR9 128 aa2.48□□□□□ -2.01
C11orf54-207ENST00000528288 KRTAP2-1Q9BYU5 128 aa2.48□□□□□ -2.01
C11orf54-207ENST00000528288 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
C11orf54-207ENST00000528288 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
C11orf54-207ENST00000528288 SYNE2Q8WXH0 6885 aaKnown RBP2.42□□□□□ -2.02
C11orf54-207ENST00000528288 SYNE1Q8NF91 8797 aaKnown RBP2.41□□□□□ -2.02
C11orf54-207ENST00000528288 MT1MQ8N339 61 aa2.4□□□□□ -2.02
C11orf54-207ENST00000528288 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
C11orf54-207ENST00000528288 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
C11orf54-207ENST00000528288 SPRR2FQ96RM1 72 aa2.38□□□□□ -2.03
C11orf54-207ENST00000528288 MDN1Q9NU22 5596 aa2.34□□□□□ -2.03
C11orf54-207ENST00000528288 LCE1FQ5T754 118 aa2.33□□□□□ -2.04
C11orf54-207ENST00000528288 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
C11orf54-207ENST00000528288 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
C11orf54-207ENST00000528288 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
C11orf54-207ENST00000528288 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
C11orf54-207ENST00000528288 SPRR2EP22531 72 aa2.15□□□□□ -2.07
C11orf54-207ENST00000528288 SPRR2BP35325 72 aa2.15□□□□□ -2.07
C11orf54-207ENST00000528288 SPRR2AP35326 72 aa2.15□□□□□ -2.07
C11orf54-207ENST00000528288 MT1AP04731 61 aa2.12□□□□□ -2.07
C11orf54-207ENST00000528288 LCE3DQ9BYE3 92 aa2.1□□□□□ -2.07
C11orf54-207ENST00000528288 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
C11orf54-207ENST00000528288 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
C11orf54-207ENST00000528288 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
C11orf54-207ENST00000528288 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
C11orf54-207ENST00000528288 KRTAP2-2Q9BYT5 123 aa2.04□□□□□ -2.08
C11orf54-207ENST00000528288 SPRR2DP22532 72 aa2.04□□□□□ -2.08
C11orf54-207ENST00000528288 PRM1P04553 51 aa2.03□□□□□ -2.08
C11orf54-207ENST00000528288 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
C11orf54-207ENST00000528288 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
C11orf54-207ENST00000528288 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
C11orf54-207ENST00000528288 NEBP20929 6669 aa1.99□□□□□ -2.09
C11orf54-207ENST00000528288 MT3P25713 68 aa1.95□□□□□ -2.1
C11orf54-207ENST00000528288 MT4P47944 62 aa1.88□□□□□ -2.11
C11orf54-207ENST00000528288 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
C11orf54-207ENST00000528288 KRTAP5-4Q6L8H1 288 aa1.79□□□□□ -2.12
C11orf54-207ENST00000528288 KRTAP20-1Q3LI63 56 aa1.78□□□□□ -2.12
C11orf54-207ENST00000528288 KRTAP20-2Q3LI61 65 aa1.74□□□□□ -2.13
C11orf54-207ENST00000528288 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
C11orf54-207ENST00000528288 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
C11orf54-207ENST00000528288 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
C11orf54-207ENST00000528288 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
C11orf54-207ENST00000528288 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
C11orf54-207ENST00000528288 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
C11orf54-207ENST00000528288 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
C11orf54-207ENST00000528288 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
C11orf54-207ENST00000528288 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
C11orf54-207ENST00000528288 KRTAP5-1Q6L8H4 278 aa1.53□□□□□ -2.16
C11orf54-207ENST00000528288 KRTAP5-10Q6L8G5 202 aa1.52□□□□□ -2.17
C11orf54-207ENST00000528288 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
C11orf54-207ENST00000528288 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
C11orf54-207ENST00000528288 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
C11orf54-207ENST00000528288 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
C11orf54-207ENST00000528288 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
C11orf54-207ENST00000528288 PHGR1C9JFL3 82 aa1.08□□□□□ -2.24
C11orf54-207ENST00000528288 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 81.5 ms