RNA–Protein interactions for RNA: ENST00000527934.1

SORL1-206, Transcript of sortilin related receptor 1, humanhuman

TSL 2 BASIC

Gene SORL1, Length 3,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-206ENST00000527934 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
SORL1-206ENST00000527934 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
SORL1-206ENST00000527934 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
SORL1-206ENST00000527934 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
SORL1-206ENST00000527934 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
SORL1-206ENST00000527934 DSTQ03001 7570 aaKnown RBP3.74□□□□□ -1.81
SORL1-206ENST00000527934 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
SORL1-206ENST00000527934 SPRR2FQ96RM1 72 aa3.68□□□□□ -1.82
SORL1-206ENST00000527934 KRTAP9-2Q9BYQ4 174 aa3.66□□□□□ -1.82
SORL1-206ENST00000527934 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
SORL1-206ENST00000527934 MT1GP13640 62 aa3.65□□□□□ -1.83
SORL1-206ENST00000527934 KRTAP19-3Q7Z4W3 81 aa3.64□□□□□ -1.83
SORL1-206ENST00000527934 MT1MQ8N339 61 aa3.63□□□□□ -1.83
SORL1-206ENST00000527934 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
SORL1-206ENST00000527934 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
SORL1-206ENST00000527934 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
SORL1-206ENST00000527934 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
SORL1-206ENST00000527934 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
SORL1-206ENST00000527934 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
SORL1-206ENST00000527934 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
SORL1-206ENST00000527934 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
SORL1-206ENST00000527934 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
SORL1-206ENST00000527934 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
SORL1-206ENST00000527934 KRTAP12-4P60329 112 aa3.46□□□□□ -1.85
SORL1-206ENST00000527934 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
SORL1-206ENST00000527934 SYNE1Q8NF91 8797 aaKnown RBP3.43□□□□□ -1.86
SORL1-206ENST00000527934 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
SORL1-206ENST00000527934 SPRR2EP22531 72 aa3.39□□□□□ -1.87
SORL1-206ENST00000527934 SPRR2BP35325 72 aa3.39□□□□□ -1.87
SORL1-206ENST00000527934 SPRR2AP35326 72 aa3.39□□□□□ -1.87
SORL1-206ENST00000527934 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
SORL1-206ENST00000527934 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
SORL1-206ENST00000527934 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
SORL1-206ENST00000527934 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SORL1-206ENST00000527934 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
SORL1-206ENST00000527934 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
SORL1-206ENST00000527934 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
SORL1-206ENST00000527934 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
SORL1-206ENST00000527934 SPRR2DP22532 72 aa3.24□□□□□ -1.89
SORL1-206ENST00000527934 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
SORL1-206ENST00000527934 PRM1P04553 51 aa3.2□□□□□ -1.9
SORL1-206ENST00000527934 MT1AP04731 61 aa3.19□□□□□ -1.9
SORL1-206ENST00000527934 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
SORL1-206ENST00000527934 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
SORL1-206ENST00000527934 NEBP20929 6669 aa3.07□□□□□ -1.92
SORL1-206ENST00000527934 LCE3EQ5T5B0 92 aa3.03□□□□□ -1.92
SORL1-206ENST00000527934 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
SORL1-206ENST00000527934 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
SORL1-206ENST00000527934 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
SORL1-206ENST00000527934 KRTAP4-11Q9BYQ6 195 aa2.94□□□□□ -1.94
SORL1-206ENST00000527934 MT4P47944 62 aa2.93□□□□□ -1.94
SORL1-206ENST00000527934 MT3P25713 68 aa2.89□□□□□ -1.95
SORL1-206ENST00000527934 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
SORL1-206ENST00000527934 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
SORL1-206ENST00000527934 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
SORL1-206ENST00000527934 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
SORL1-206ENST00000527934 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
SORL1-206ENST00000527934 KRTAP20-1Q3LI63 56 aa2.65□□□□□ -1.99
SORL1-206ENST00000527934 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SORL1-206ENST00000527934 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
SORL1-206ENST00000527934 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
SORL1-206ENST00000527934 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
SORL1-206ENST00000527934 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
SORL1-206ENST00000527934 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
SORL1-206ENST00000527934 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
SORL1-206ENST00000527934 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
SORL1-206ENST00000527934 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
SORL1-206ENST00000527934 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SORL1-206ENST00000527934 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
SORL1-206ENST00000527934 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.05□□□□□ -2.08
SORL1-206ENST00000527934 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SORL1-206ENST00000527934 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
SORL1-206ENST00000527934 GPR98Q8WXG9 6306 aa2.04□□□□□ -2.08
SORL1-206ENST00000527934 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SORL1-206ENST00000527934 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SORL1-206ENST00000527934 AHNAKQ09666 5890 aaKnown RBP1.63□□□□□ -2.15
SORL1-206ENST00000527934 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 28.3 ms