RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 KRTAP4-2Q9BYR5 136 aa2.57□□□□□ -2
CTNND1-216ENST00000527467 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
CTNND1-216ENST00000527467 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
CTNND1-216ENST00000527467 KRTAP2-1Q9BYU5 128 aa2.54□□□□□ -2
CTNND1-216ENST00000527467 LRP2P98164 4655 aa2.53□□□□□ -2.01
CTNND1-216ENST00000527467 RNF213Q63HN8 5207 aa2.52□□□□□ -2.01
CTNND1-216ENST00000527467 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CTNND1-216ENST00000527467 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
CTNND1-216ENST00000527467 MT1GP13640 62 aa2.47□□□□□ -2.01
CTNND1-216ENST00000527467 KRTAP19-2Q3LHN2 52 aa2.47□□□□□ -2.01
CTNND1-216ENST00000527467 MT1BP07438 61 aa2.46□□□□□ -2.01
CTNND1-216ENST00000527467 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
CTNND1-216ENST00000527467 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
CTNND1-216ENST00000527467 LPAP08519 4548 aa2.43□□□□□ -2.02
CTNND1-216ENST00000527467 SYNE2Q8WXH0 6885 aaKnown RBP2.39□□□□□ -2.03
CTNND1-216ENST00000527467 PRM1P04553 51 aa2.39□□□□□ -2.03
CTNND1-216ENST00000527467 LCE4AQ5TA78 99 aa2.38□□□□□ -2.03
CTNND1-216ENST00000527467 FAT4Q6V0I7 4981 aa2.38□□□□□ -2.03
CTNND1-216ENST00000527467 KRTAP19-3Q7Z4W3 81 aa2.37□□□□□ -2.03
CTNND1-216ENST00000527467 MT1XP80297 61 aa2.37□□□□□ -2.03
CTNND1-216ENST00000527467 KRTAP4-7Q9BYR0 210 aa2.37□□□□□ -2.03
CTNND1-216ENST00000527467 FLGP20930 4061 aaPredicted RBP2.35□□□□□ -2.03
CTNND1-216ENST00000527467 KRTAP5-3Q6L8H2 238 aa2.33□□□□□ -2.04
CTNND1-216ENST00000527467 NEBP20929 6669 aa2.33□□□□□ -2.04
CTNND1-216ENST00000527467 MT4P47944 62 aa2.33□□□□□ -2.04
CTNND1-216ENST00000527467 KRTAP4-9Q9BYQ8 210 aa2.24□□□□□ -2.05
CTNND1-216ENST00000527467 MT1LQ93083 61 aa2.24□□□□□ -2.05
CTNND1-216ENST00000527467 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
CTNND1-216ENST00000527467 KRTAP5-9P26371 169 aa2.22□□□□□ -2.05
CTNND1-216ENST00000527467 MT1EP04732 61 aa2.21□□□□□ -2.06
CTNND1-216ENST00000527467 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
CTNND1-216ENST00000527467 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
CTNND1-216ENST00000527467 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
CTNND1-216ENST00000527467 MT1MQ8N339 61 aa2.17□□□□□ -2.06
CTNND1-216ENST00000527467 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.06
CTNND1-216ENST00000527467 FSIP2Q5CZC0 6907 aa2.14□□□□□ -2.07
CTNND1-216ENST00000527467 MUC2Q02817 5179 aa2.1□□□□□ -2.07
CTNND1-216ENST00000527467 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
CTNND1-216ENST00000527467 USH2AO75445 5202 aa2.09□□□□□ -2.07
CTNND1-216ENST00000527467 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.08
CTNND1-216ENST00000527467 LCE5AQ5TCM9 118 aa2.08□□□□□ -2.08
CTNND1-216ENST00000527467 MT1AP04731 61 aa2.01□□□□□ -2.09
CTNND1-216ENST00000527467 KRTAP6-2Q3LI66 62 aa1.98□□□□□ -2.09
CTNND1-216ENST00000527467 LCE1CQ5T751 118 aa1.98□□□□□ -2.09
CTNND1-216ENST00000527467 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
CTNND1-216ENST00000527467 LCE1FQ5T754 118 aa1.98□□□□□ -2.09
CTNND1-216ENST00000527467 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
CTNND1-216ENST00000527467 OBSCNQ5VST9 7968 aa1.96□□□□□ -2.1
CTNND1-216ENST00000527467 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
CTNND1-216ENST00000527467 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
CTNND1-216ENST00000527467 FCGBPQ9Y6R7 5405 aaPredicted RBP1.92□□□□□ -2.1
CTNND1-216ENST00000527467 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
CTNND1-216ENST00000527467 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
CTNND1-216ENST00000527467 KRTAP9-6A8MVA2 160 aa1.87□□□□□ -2.11
CTNND1-216ENST00000527467 KRTAP20-2Q3LI61 65 aa1.84□□□□□ -2.12
CTNND1-216ENST00000527467 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
CTNND1-216ENST00000527467 HMCN1Q96RW7 5635 aa1.81□□□□□ -2.12
CTNND1-216ENST00000527467 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CTNND1-216ENST00000527467 KRTAP6-1Q3LI64 71 aa1.78□□□□□ -2.12
CTNND1-216ENST00000527467 KMT2DO14686 5537 aa1.75□□□□□ -2.13
CTNND1-216ENST00000527467 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
CTNND1-216ENST00000527467 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
CTNND1-216ENST00000527467 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
CTNND1-216ENST00000527467 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
CTNND1-216ENST00000527467 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
CTNND1-216ENST00000527467 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
CTNND1-216ENST00000527467 DSTQ03001 7570 aaKnown RBP1.58□□□□□ -2.16
CTNND1-216ENST00000527467 MUC5ACP98088 5654 aa1.56□□□□□ -2.16
CTNND1-216ENST00000527467 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
CTNND1-216ENST00000527467 KRTAP5-5Q701N2 237 aaPredicted RBP1.56□□□□□ -2.16
CTNND1-216ENST00000527467 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
CTNND1-216ENST00000527467 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
CTNND1-216ENST00000527467 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
CTNND1-216ENST00000527467 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
CTNND1-216ENST00000527467 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
CTNND1-216ENST00000527467 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
CTNND1-216ENST00000527467 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms