RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 C10orf95Q9H7T3 257 aa4.1□□□□□ -1.75
UBQLN1-204ENST00000527373 TNP1P09430 55 aa4.08□□□□□ -1.76
UBQLN1-204ENST00000527373 SPRR2FQ96RM1 72 aa4.07□□□□□ -1.76
UBQLN1-204ENST00000527373 CDC42SE1Q9NRR8 79 aa4.07□□□□□ -1.76
UBQLN1-204ENST00000527373 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
UBQLN1-204ENST00000527373 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
UBQLN1-204ENST00000527373 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
UBQLN1-204ENST00000527373 SPRR2EP22531 72 aa3.95□□□□□ -1.78
UBQLN1-204ENST00000527373 SPRR2BP35325 72 aa3.95□□□□□ -1.78
UBQLN1-204ENST00000527373 SPRR2AP35326 72 aa3.95□□□□□ -1.78
UBQLN1-204ENST00000527373 KRTAP25-1Q3LHN0 102 aa3.95□□□□□ -1.78
UBQLN1-204ENST00000527373 LCE3AQ5TA76 89 aa3.95□□□□□ -1.78
UBQLN1-204ENST00000527373 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
UBQLN1-204ENST00000527373 ROMO1P60602 79 aa3.92□□□□□ -1.78
UBQLN1-204ENST00000527373 KRTAP19-5Q3LI72 72 aa3.9□□□□□ -1.79
UBQLN1-204ENST00000527373 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
UBQLN1-204ENST00000527373 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
UBQLN1-204ENST00000527373 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
UBQLN1-204ENST00000527373 NEBP20929 6669 aa3.86□□□□□ -1.79
UBQLN1-204ENST00000527373 MT1EP04732 61 aa3.86□□□□□ -1.79
UBQLN1-204ENST00000527373 SPRR2DP22532 72 aa3.81□□□□□ -1.8
UBQLN1-204ENST00000527373 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
UBQLN1-204ENST00000527373 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
UBQLN1-204ENST00000527373 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
UBQLN1-204ENST00000527373 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
UBQLN1-204ENST00000527373 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
UBQLN1-204ENST00000527373 MT1LQ93083 61 aa3.73□□□□□ -1.81
UBQLN1-204ENST00000527373 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
UBQLN1-204ENST00000527373 MT1GP13640 62 aa3.72□□□□□ -1.81
UBQLN1-204ENST00000527373 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
UBQLN1-204ENST00000527373 MT1MQ8N339 61 aa3.66□□□□□ -1.82
UBQLN1-204ENST00000527373 A0A0A0MQY5 61 aa3.63□□□□□ -1.83
UBQLN1-204ENST00000527373 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
UBQLN1-204ENST00000527373 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
UBQLN1-204ENST00000527373 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
UBQLN1-204ENST00000527373 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
UBQLN1-204ENST00000527373 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
UBQLN1-204ENST00000527373 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
UBQLN1-204ENST00000527373 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
UBQLN1-204ENST00000527373 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
UBQLN1-204ENST00000527373 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
UBQLN1-204ENST00000527373 MT3P25713 68 aa3.44□□□□□ -1.86
UBQLN1-204ENST00000527373 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
UBQLN1-204ENST00000527373 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
UBQLN1-204ENST00000527373 MT4P47944 62 aa3.33□□□□□ -1.88
UBQLN1-204ENST00000527373 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
UBQLN1-204ENST00000527373 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
UBQLN1-204ENST00000527373 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
UBQLN1-204ENST00000527373 MT1AP04731 61 aa3.18□□□□□ -1.9
UBQLN1-204ENST00000527373 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
UBQLN1-204ENST00000527373 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
UBQLN1-204ENST00000527373 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
UBQLN1-204ENST00000527373 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
UBQLN1-204ENST00000527373 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
UBQLN1-204ENST00000527373 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
UBQLN1-204ENST00000527373 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
UBQLN1-204ENST00000527373 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
UBQLN1-204ENST00000527373 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
UBQLN1-204ENST00000527373 LUZP6Q538Z0 58 aa2.96□□□□□ -1.94
UBQLN1-204ENST00000527373 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
UBQLN1-204ENST00000527373 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
UBQLN1-204ENST00000527373 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
UBQLN1-204ENST00000527373 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
UBQLN1-204ENST00000527373 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
UBQLN1-204ENST00000527373 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
UBQLN1-204ENST00000527373 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
UBQLN1-204ENST00000527373 MUC5ACP98088 5654 aa2.53□□□□□ -2
UBQLN1-204ENST00000527373 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
UBQLN1-204ENST00000527373 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
UBQLN1-204ENST00000527373 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
UBQLN1-204ENST00000527373 AHNAKQ09666 5890 aaKnown RBP2.37□□□□□ -2.03
UBQLN1-204ENST00000527373 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
UBQLN1-204ENST00000527373 INE1O15225 51 aa2.13□□□□□ -2.07
UBQLN1-204ENST00000527373 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
UBQLN1-204ENST00000527373 PRM1P04553 51 aa2.03□□□□□ -2.08
UBQLN1-204ENST00000527373 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
UBQLN1-204ENST00000527373 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
UBQLN1-204ENST00000527373 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 174.2 ms