RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 PMAIP1Q13794 54 aa5.99□□□□□ -1.45
CAPN1-205ENST00000526954 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
CAPN1-205ENST00000526954 KRTAP19-3Q7Z4W3 81 aa5.95□□□□□ -1.46
CAPN1-205ENST00000526954 LCE5AQ5TCM9 118 aa5.91□□□□□ -1.46
CAPN1-205ENST00000526954 MT1LQ93083 61 aa5.91□□□□□ -1.46
CAPN1-205ENST00000526954 MT1GP13640 62 aa5.89□□□□□ -1.47
CAPN1-205ENST00000526954 SPRR2DP22532 72 aa5.86□□□□□ -1.47
CAPN1-205ENST00000526954 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
CAPN1-205ENST00000526954 MT1MQ8N339 61 aa5.77□□□□□ -1.49
CAPN1-205ENST00000526954 KRTAP20-1Q3LI63 56 aa5.76□□□□□ -1.49
CAPN1-205ENST00000526954 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
CAPN1-205ENST00000526954 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
CAPN1-205ENST00000526954 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
CAPN1-205ENST00000526954 LCE3BQ5TA77 95 aa5.68□□□□□ -1.5
CAPN1-205ENST00000526954 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
CAPN1-205ENST00000526954 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
CAPN1-205ENST00000526954 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
CAPN1-205ENST00000526954 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
CAPN1-205ENST00000526954 KTN1-AS1Q86SY8 53 aa5.6□□□□□ -1.51
CAPN1-205ENST00000526954 KRTAP4-3Q9BYR4 195 aa5.6□□□□□ -1.51
CAPN1-205ENST00000526954 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
CAPN1-205ENST00000526954 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
CAPN1-205ENST00000526954 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
CAPN1-205ENST00000526954 KRTAP5-5Q701N2 237 aaPredicted RBP5.26□□□□□ -1.57
CAPN1-205ENST00000526954 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
CAPN1-205ENST00000526954 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CAPN1-205ENST00000526954 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
CAPN1-205ENST00000526954 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
CAPN1-205ENST00000526954 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
CAPN1-205ENST00000526954 SPRR5A0A1B0GTR4 108 aa5.13□□□□□ -1.59
CAPN1-205ENST00000526954 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
CAPN1-205ENST00000526954 MT4P47944 62 aa5.08□□□□□ -1.6
CAPN1-205ENST00000526954 MT1AP04731 61 aa5.04□□□□□ -1.6
CAPN1-205ENST00000526954 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CAPN1-205ENST00000526954 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
CAPN1-205ENST00000526954 KRTAP12-4P60329 112 aa4.99□□□□□ -1.61
CAPN1-205ENST00000526954 HMCN1Q96RW7 5635 aa4.97□□□□□ -1.61
CAPN1-205ENST00000526954 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
CAPN1-205ENST00000526954 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
CAPN1-205ENST00000526954 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
CAPN1-205ENST00000526954 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
CAPN1-205ENST00000526954 LUZP6Q538Z0 58 aa4.69□□□□□ -1.66
CAPN1-205ENST00000526954 KRTAP5-2Q701N4 177 aa4.69□□□□□ -1.66
CAPN1-205ENST00000526954 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
CAPN1-205ENST00000526954 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
CAPN1-205ENST00000526954 MT3P25713 68 aa4.58□□□□□ -1.68
CAPN1-205ENST00000526954 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
CAPN1-205ENST00000526954 KRTAP5-10Q6L8G5 202 aa4.5□□□□□ -1.69
CAPN1-205ENST00000526954 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
CAPN1-205ENST00000526954 KRTAP5-7Q6L8G8 165 aa4.27□□□□□ -1.73
CAPN1-205ENST00000526954 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
CAPN1-205ENST00000526954 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
CAPN1-205ENST00000526954 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
CAPN1-205ENST00000526954 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CAPN1-205ENST00000526954 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CAPN1-205ENST00000526954 KRTAP5-1Q6L8H4 278 aa4.1□□□□□ -1.75
CAPN1-205ENST00000526954 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
CAPN1-205ENST00000526954 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
CAPN1-205ENST00000526954 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
CAPN1-205ENST00000526954 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
CAPN1-205ENST00000526954 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
CAPN1-205ENST00000526954 LCE1BQ5T7P3 118 aa3.82□□□□□ -1.8
CAPN1-205ENST00000526954 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
CAPN1-205ENST00000526954 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.82
CAPN1-205ENST00000526954 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
CAPN1-205ENST00000526954 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
CAPN1-205ENST00000526954 INE1O15225 51 aa3.52□□□□□ -1.85
CAPN1-205ENST00000526954 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
CAPN1-205ENST00000526954 H3BS24 57 aa3.32□□□□□ -1.88
CAPN1-205ENST00000526954 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
CAPN1-205ENST00000526954 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
CAPN1-205ENST00000526954 PRM1P04553 51 aa3.22□□□□□ -1.89
CAPN1-205ENST00000526954 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CAPN1-205ENST00000526954 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
CAPN1-205ENST00000526954 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.95
CAPN1-205ENST00000526954 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
CAPN1-205ENST00000526954 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
CAPN1-205ENST00000526954 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 18.4 ms