RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
SMIM3-201ENST00000526627 KRTAP4-3Q9BYR4 195 aa6.72□□□□□ -1.33
SMIM3-201ENST00000526627 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
SMIM3-201ENST00000526627 LOC100996750A0A140TA64 210 aa6.66□□□□□ -1.34
SMIM3-201ENST00000526627 KRTAP19-3Q7Z4W3 81 aa6.66□□□□□ -1.34
SMIM3-201ENST00000526627 MT1MQ8N339 61 aa6.66□□□□□ -1.34
SMIM3-201ENST00000526627 MT1GP13640 62 aa6.62□□□□□ -1.35
SMIM3-201ENST00000526627 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
SMIM3-201ENST00000526627 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
SMIM3-201ENST00000526627 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
SMIM3-201ENST00000526627 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
SMIM3-201ENST00000526627 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
SMIM3-201ENST00000526627 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
SMIM3-201ENST00000526627 DSTQ03001 7570 aaKnown RBP6.18□□□□□ -1.42
SMIM3-201ENST00000526627 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
SMIM3-201ENST00000526627 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
SMIM3-201ENST00000526627 LCE3BQ5TA77 95 aa6.06□□□□□ -1.44
SMIM3-201ENST00000526627 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
SMIM3-201ENST00000526627 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
SMIM3-201ENST00000526627 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
SMIM3-201ENST00000526627 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
SMIM3-201ENST00000526627 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
SMIM3-201ENST00000526627 MT1AP04731 61 aa5.97□□□□□ -1.45
SMIM3-201ENST00000526627 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
SMIM3-201ENST00000526627 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
SMIM3-201ENST00000526627 SPRR2EP22531 72 aa5.87□□□□□ -1.47
SMIM3-201ENST00000526627 SPRR2BP35325 72 aa5.87□□□□□ -1.47
SMIM3-201ENST00000526627 SPRR2AP35326 72 aa5.87□□□□□ -1.47
SMIM3-201ENST00000526627 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
SMIM3-201ENST00000526627 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
SMIM3-201ENST00000526627 LCE3DQ9BYE3 92 aa5.69□□□□□ -1.5
SMIM3-201ENST00000526627 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
SMIM3-201ENST00000526627 SPRR2DP22532 72 aa5.62□□□□□ -1.51
SMIM3-201ENST00000526627 LCE3EQ5T5B0 92 aa5.62□□□□□ -1.51
SMIM3-201ENST00000526627 KRTAP6-3Q3LI67 103 aa5.56□□□□□ -1.52
SMIM3-201ENST00000526627 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
SMIM3-201ENST00000526627 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
SMIM3-201ENST00000526627 MT3P25713 68 aa5.34□□□□□ -1.55
SMIM3-201ENST00000526627 PRM1P04553 51 aa5.33□□□□□ -1.56
SMIM3-201ENST00000526627 NEBP20929 6669 aa5.3□□□□□ -1.56
SMIM3-201ENST00000526627 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
SMIM3-201ENST00000526627 KRTAP4-6Q9BYQ5 205 aa5.03□□□□□ -1.6
SMIM3-201ENST00000526627 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
SMIM3-201ENST00000526627 MT4P47944 62 aa4.94□□□□□ -1.62
SMIM3-201ENST00000526627 KRTAP20-2Q3LI61 65 aa4.91□□□□□ -1.62
SMIM3-201ENST00000526627 KRTAP5-2Q701N4 177 aa4.91□□□□□ -1.62
SMIM3-201ENST00000526627 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
SMIM3-201ENST00000526627 KRTAP2-2Q9BYT5 123 aa4.88□□□□□ -1.63
SMIM3-201ENST00000526627 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
SMIM3-201ENST00000526627 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
SMIM3-201ENST00000526627 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
SMIM3-201ENST00000526627 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
SMIM3-201ENST00000526627 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
SMIM3-201ENST00000526627 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
SMIM3-201ENST00000526627 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
SMIM3-201ENST00000526627 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
SMIM3-201ENST00000526627 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
SMIM3-201ENST00000526627 KRTAP5-1Q6L8H4 278 aa4.21□□□□□ -1.74
SMIM3-201ENST00000526627 LCE1CQ5T751 118 aa4.16□□□□□ -1.74
SMIM3-201ENST00000526627 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
SMIM3-201ENST00000526627 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
SMIM3-201ENST00000526627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
SMIM3-201ENST00000526627 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
SMIM3-201ENST00000526627 KRTAP5-8O75690 187 aa3.9□□□□□ -1.78
SMIM3-201ENST00000526627 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
SMIM3-201ENST00000526627 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
SMIM3-201ENST00000526627 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
SMIM3-201ENST00000526627 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
SMIM3-201ENST00000526627 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
SMIM3-201ENST00000526627 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
SMIM3-201ENST00000526627 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
SMIM3-201ENST00000526627 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
SMIM3-201ENST00000526627 KRTAP9-9Q9BYP9 154 aa3.35□□□□□ -1.87
SMIM3-201ENST00000526627 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
SMIM3-201ENST00000526627 PHGR1C9JFL3 82 aa3.11□□□□□ -1.91
SMIM3-201ENST00000526627 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
SMIM3-201ENST00000526627 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms