RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 M0QZ58 72 aa1.3□□□□□ -2.2
COPB1-205ENST00000526527 KRTAP12-3P60328 96 aa1.3□□□□□ -2.2
COPB1-205ENST00000526527 HERC1Q15751 4861 aa1.3□□□□□ -2.2
COPB1-205ENST00000526527 PKHD1L1Q86WI1 4243 aa1.29□□□□□ -2.2
COPB1-205ENST00000526527 SRRM2Q9UQ35 2752 aaKnown RBP1.29□□□□□ -2.2
COPB1-205ENST00000526527 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
COPB1-205ENST00000526527 HMCN2Q8NDA2 5059 aa1.28□□□□□ -2.2
COPB1-205ENST00000526527 KRTAP12-1P59990 96 aa1.28□□□□□ -2.2
COPB1-205ENST00000526527 KRTAP12-4P60329 112 aa1.28□□□□□ -2.2
COPB1-205ENST00000526527 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
COPB1-205ENST00000526527 FCGBPQ9Y6R7 5405 aaPredicted RBP1.26□□□□□ -2.21
COPB1-205ENST00000526527 SPINK6Q6UWN8 80 aa1.25□□□□□ -2.21
COPB1-205ENST00000526527 TNXBP22105 4242 aa1.25□□□□□ -2.21
COPB1-205ENST00000526527 LRP2P98164 4655 aa1.23□□□□□ -2.21
COPB1-205ENST00000526527 UBR4Q5T4S7 5183 aa1.23□□□□□ -2.21
COPB1-205ENST00000526527 LPAP08519 4548 aa1.22□□□□□ -2.21
COPB1-205ENST00000526527 KRTAP6-3Q3LI67 103 aa1.21□□□□□ -2.22
COPB1-205ENST00000526527 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
COPB1-205ENST00000526527 C9orf92A6NGG3 77 aa1.19□□□□□ -2.22
COPB1-205ENST00000526527 TNP1P09430 55 aa1.19□□□□□ -2.22
COPB1-205ENST00000526527 MUC17Q685J3 4493 aa1.18□□□□□ -2.22
COPB1-205ENST00000526527 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.23
COPB1-205ENST00000526527 RPS29P62273 56 aaKnown RBP1.14□□□□□ -2.23
COPB1-205ENST00000526527 M0R2T5 61 aa1.12□□□□□ -2.23
COPB1-205ENST00000526527 MUC2Q02817 5179 aa1.11□□□□□ -2.23
COPB1-205ENST00000526527 KRTAP19-2Q3LHN2 52 aa1.1□□□□□ -2.23
COPB1-205ENST00000526527 MT1HP80294 61 aa1.09□□□□□ -2.23
COPB1-205ENST00000526527 FLGP20930 4061 aaPredicted RBP1.04□□□□□ -2.24
COPB1-205ENST00000526527 MT2AP02795 61 aa1.03□□□□□ -2.24
COPB1-205ENST00000526527 MT1FP04733 61 aa1.03□□□□□ -2.24
COPB1-205ENST00000526527 GPR98Q8WXG9 6306 aa1.01□□□□□ -2.25
COPB1-205ENST00000526527 SSPOA2VEC9 5147 aa1□□□□□ -2.25
COPB1-205ENST00000526527 USH2AO75445 5202 aa1□□□□□ -2.25
COPB1-205ENST00000526527 FSIP2Q5CZC0 6907 aa0.99□□□□□ -2.25
COPB1-205ENST00000526527 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
COPB1-205ENST00000526527 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
COPB1-205ENST00000526527 KRTAP2-1Q9BYU5 128 aa0.95□□□□□ -2.26
COPB1-205ENST00000526527 MT1BP07438 61 aa0.94□□□□□ -2.26
COPB1-205ENST00000526527 KRTAP8-1Q8IUC2 63 aa0.93□□□□□ -2.26
COPB1-205ENST00000526527 KRTAP19-6Q3LI70 58 aa0.92□□□□□ -2.26
COPB1-205ENST00000526527 KRTAP19-8Q3LI54 63 aa0.91□□□□□ -2.26
COPB1-205ENST00000526527 SPRR2GQ9BYE4 73 aa0.91□□□□□ -2.26
COPB1-205ENST00000526527 MACF1Q9UPN3 7388 aaKnown RBP0.9□□□□□ -2.27
COPB1-205ENST00000526527 MT1XP80297 61 aa0.89□□□□□ -2.27
COPB1-205ENST00000526527 SYNE2Q8WXH0 6885 aaKnown RBP0.88□□□□□ -2.27
COPB1-205ENST00000526527 PRM1P04553 51 aa0.86□□□□□ -2.27
COPB1-205ENST00000526527 NEBP20929 6669 aa0.85□□□□□ -2.27
COPB1-205ENST00000526527 SPRR2FQ96RM1 72 aa0.84□□□□□ -2.27
COPB1-205ENST00000526527 KMT2DO14686 5537 aa0.83□□□□□ -2.28
COPB1-205ENST00000526527 SPRR2EP22531 72 aa0.82□□□□□ -2.28
COPB1-205ENST00000526527 SPRR2BP35325 72 aa0.82□□□□□ -2.28
COPB1-205ENST00000526527 SPRR2AP35326 72 aa0.82□□□□□ -2.28
COPB1-205ENST00000526527 KRTAP5-10Q6L8G5 202 aa0.82□□□□□ -2.28
COPB1-205ENST00000526527 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
COPB1-205ENST00000526527 MUC12Q9UKN1 5478 aa0.81□□□□□ -2.28
COPB1-205ENST00000526527 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
COPB1-205ENST00000526527 KRTAP20-1Q3LI63 56 aa0.8□□□□□ -2.28
COPB1-205ENST00000526527 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
COPB1-205ENST00000526527 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
COPB1-205ENST00000526527 MT1AP04731 61 aa0.79□□□□□ -2.28
COPB1-205ENST00000526527 SPRR2DP22532 72 aa0.79□□□□□ -2.28
COPB1-205ENST00000526527 KRTAP19-5Q3LI72 72 aa0.79□□□□□ -2.28
COPB1-205ENST00000526527 KRTAP19-7Q3SYF9 63 aa0.79□□□□□ -2.28
COPB1-205ENST00000526527 MT1EP04732 61 aa0.78□□□□□ -2.28
COPB1-205ENST00000526527 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
COPB1-205ENST00000526527 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
COPB1-205ENST00000526527 MT1LQ93083 61 aa0.76□□□□□ -2.29
COPB1-205ENST00000526527 MT1MQ8N339 61 aa0.75□□□□□ -2.29
COPB1-205ENST00000526527 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
COPB1-205ENST00000526527 MT1GP13640 62 aa0.71□□□□□ -2.3
COPB1-205ENST00000526527 MT4P47944 62 aa0.71□□□□□ -2.3
COPB1-205ENST00000526527 SYNE1Q8NF91 8797 aaKnown RBP0.7□□□□□ -2.3
COPB1-205ENST00000526527 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
COPB1-205ENST00000526527 KRTAP20-2Q3LI61 65 aa0.65□□□□□ -2.31
COPB1-205ENST00000526527 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.31
COPB1-205ENST00000526527 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
COPB1-205ENST00000526527 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
COPB1-205ENST00000526527 PHGR1C9JFL3 82 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms