RNA–Protein interactions for RNA: ENST00000526477.5

CAPRIN1-203, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 587 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-203ENST00000526477 KRTAP19-3Q7Z4W3 81 aa8.58□□□□□ -1.04
CAPRIN1-203ENST00000526477 LCE5AQ5TCM9 118 aa8.57□□□□□ -1.04
CAPRIN1-203ENST00000526477 A6NED7 52 aa8.56□□□□□ -1.04
CAPRIN1-203ENST00000526477 KRTAP25-1Q3LHN0 102 aa8.42□□□□□ -1.06
CAPRIN1-203ENST00000526477 DSTQ03001 7570 aaKnown RBP8.4□□□□□ -1.06
CAPRIN1-203ENST00000526477 MT1GP13640 62 aa8.4□□□□□ -1.06
CAPRIN1-203ENST00000526477 MT1LQ93083 61 aa8.4□□□□□ -1.06
CAPRIN1-203ENST00000526477 KRTAP12-3P60328 96 aa8.3□□□□□ -1.08
CAPRIN1-203ENST00000526477 PP632Q6XCG6 107 aa8.29□□□□□ -1.08
CAPRIN1-203ENST00000526477 MT1MQ8N339 61 aa8.29□□□□□ -1.08
CAPRIN1-203ENST00000526477 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
CAPRIN1-203ENST00000526477 KRTAP4-9Q9BYQ8 210 aa8.24□□□□□ -1.09
CAPRIN1-203ENST00000526477 KRTAP23-1A1A580 65 aa8.12□□□□□ -1.11
CAPRIN1-203ENST00000526477 KRTAP4-3Q9BYR4 195 aa8.11□□□□□ -1.11
CAPRIN1-203ENST00000526477 ROMO1P60602 79 aa8.1□□□□□ -1.11
CAPRIN1-203ENST00000526477 KRTAP4-7Q9BYR0 210 aa8.03□□□□□ -1.12
CAPRIN1-203ENST00000526477 LCE1DQ5T752 114 aa7.99□□□□□ -1.13
CAPRIN1-203ENST00000526477 HMCN1Q96RW7 5635 aa7.86□□□□□ -1.15
CAPRIN1-203ENST00000526477 KRTAP15-1Q3LI76 137 aa7.86□□□□□ -1.15
CAPRIN1-203ENST00000526477 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
CAPRIN1-203ENST00000526477 KRTAP5-10Q6L8G5 202 aa7.81□□□□□ -1.16
CAPRIN1-203ENST00000526477 KRTAP19-4Q3LI73 84 aa7.8□□□□□ -1.16
CAPRIN1-203ENST00000526477 AHNAK2Q8IVF2 5795 aa7.79□□□□□ -1.16
CAPRIN1-203ENST00000526477 MT4P47944 62 aa7.77□□□□□ -1.17
CAPRIN1-203ENST00000526477 KRTAP5-4Q6L8H1 288 aa7.72□□□□□ -1.17
CAPRIN1-203ENST00000526477 BRK1Q8WUW1 75 aa7.69□□□□□ -1.18
CAPRIN1-203ENST00000526477 LCE3CQ5T5A8 94 aa7.68□□□□□ -1.18
CAPRIN1-203ENST00000526477 KRTAP5-7Q6L8G8 165 aa7.62□□□□□ -1.19
CAPRIN1-203ENST00000526477 LOC100996750A0A140TA64 210 aa7.58□□□□□ -1.2
CAPRIN1-203ENST00000526477 KRTAP5-5Q701N2 237 aaPredicted RBP7.58□□□□□ -1.2
CAPRIN1-203ENST00000526477 KRTAP4-6Q9BYQ5 205 aa7.52□□□□□ -1.21
CAPRIN1-203ENST00000526477 KRTAP5-3Q6L8H2 238 aa7.46□□□□□ -1.22
CAPRIN1-203ENST00000526477 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
CAPRIN1-203ENST00000526477 KRTAP20-2Q3LI61 65 aa7.26□□□□□ -1.25
CAPRIN1-203ENST00000526477 KRTAP12-4P60329 112 aa7.25□□□□□ -1.25
CAPRIN1-203ENST00000526477 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
CAPRIN1-203ENST00000526477 PMAIP1Q13794 54 aa7.23□□□□□ -1.25
CAPRIN1-203ENST00000526477 SYNE1Q8NF91 8797 aaKnown RBP7.23□□□□□ -1.25
CAPRIN1-203ENST00000526477 MT1AP04731 61 aa7.15□□□□□ -1.26
CAPRIN1-203ENST00000526477 KRTAP6-1Q3LI64 71 aa7.1□□□□□ -1.27
CAPRIN1-203ENST00000526477 PRAC1Q96KF2 57 aa6.96□□□□□ -1.3
CAPRIN1-203ENST00000526477 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
CAPRIN1-203ENST00000526477 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
CAPRIN1-203ENST00000526477 KRTAP5-2Q701N4 177 aa6.83□□□□□ -1.32
CAPRIN1-203ENST00000526477 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
CAPRIN1-203ENST00000526477 KRTAP6-2Q3LI66 62 aa6.71□□□□□ -1.34
CAPRIN1-203ENST00000526477 AHNAKQ09666 5890 aaKnown RBP6.65□□□□□ -1.34
CAPRIN1-203ENST00000526477 MUC5ACP98088 5654 aa6.61□□□□□ -1.35
CAPRIN1-203ENST00000526477 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
CAPRIN1-203ENST00000526477 KRTAP5-8O75690 187 aa6.52□□□□□ -1.37
CAPRIN1-203ENST00000526477 MUC5BQ9HC84 5762 aaPredicted RBP6.51□□□□□ -1.37
CAPRIN1-203ENST00000526477 MT3P25713 68 aa6.5□□□□□ -1.37
CAPRIN1-203ENST00000526477 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
CAPRIN1-203ENST00000526477 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
CAPRIN1-203ENST00000526477 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
CAPRIN1-203ENST00000526477 KRTAP5-1Q6L8H4 278 aa6.06□□□□□ -1.44
CAPRIN1-203ENST00000526477 LCE1EQ5T753 118 aa5.89□□□□□ -1.47
CAPRIN1-203ENST00000526477 LUZP6Q538Z0 58 aa5.74□□□□□ -1.49
CAPRIN1-203ENST00000526477 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
CAPRIN1-203ENST00000526477 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
CAPRIN1-203ENST00000526477 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
CAPRIN1-203ENST00000526477 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
CAPRIN1-203ENST00000526477 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
CAPRIN1-203ENST00000526477 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
CAPRIN1-203ENST00000526477 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
CAPRIN1-203ENST00000526477 KRTAP4-12Q9BQ66 201 aa4.93□□□□□ -1.62
CAPRIN1-203ENST00000526477 NDUFAF8A1L188 74 aa4.91□□□□□ -1.62
CAPRIN1-203ENST00000526477 LCE1FQ5T754 118 aa4.72□□□□□ -1.65
CAPRIN1-203ENST00000526477 KRTAP21-2Q3LI59 83 aa4.68□□□□□ -1.66
CAPRIN1-203ENST00000526477 PHGR1C9JFL3 82 aa4.55□□□□□ -1.68
CAPRIN1-203ENST00000526477 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
CAPRIN1-203ENST00000526477 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
CAPRIN1-203ENST00000526477 PRM1P04553 51 aa4.17□□□□□ -1.74
CAPRIN1-203ENST00000526477 H3BS24 57 aa4.05□□□□□ -1.76
CAPRIN1-203ENST00000526477 INE1O15225 51 aa3.96□□□□□ -1.78
CAPRIN1-203ENST00000526477 MUC19Q7Z5P9 8384 aa3.89□□□□□ -1.79
CAPRIN1-203ENST00000526477 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
CAPRIN1-203ENST00000526477 MUC16Q8WXI7 14507 aa2.77□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms