RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 KRTAP5-11Q6L8G4 156 aa5.54□□□□□ -1.52
COLCA2-202ENST00000526216 PRAC1Q96KF2 57 aa5.5□□□□□ -1.53
COLCA2-202ENST00000526216 KTN1-AS1Q86SY8 53 aa5.48□□□□□ -1.53
COLCA2-202ENST00000526216 KRTAP23-1A1A580 65 aa5.46□□□□□ -1.54
COLCA2-202ENST00000526216 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.54
COLCA2-202ENST00000526216 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
COLCA2-202ENST00000526216 KRTAP19-7Q3SYF9 63 aa5.4□□□□□ -1.55
COLCA2-202ENST00000526216 KRTAP19-5Q3LI72 72 aa5.39□□□□□ -1.55
COLCA2-202ENST00000526216 NEBP20929 6669 aa5.37□□□□□ -1.55
COLCA2-202ENST00000526216 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
COLCA2-202ENST00000526216 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
COLCA2-202ENST00000526216 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
COLCA2-202ENST00000526216 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
COLCA2-202ENST00000526216 MT1EP04732 61 aa5.29□□□□□ -1.56
COLCA2-202ENST00000526216 H3BS24 57 aa5.28□□□□□ -1.56
COLCA2-202ENST00000526216 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
COLCA2-202ENST00000526216 SPRR2FQ96RM1 72 aa5.28□□□□□ -1.56
COLCA2-202ENST00000526216 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
COLCA2-202ENST00000526216 MT1LQ93083 61 aa5.16□□□□□ -1.58
COLCA2-202ENST00000526216 KRTAP15-1Q3LI76 137 aa5.15□□□□□ -1.59
COLCA2-202ENST00000526216 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
COLCA2-202ENST00000526216 LCE1AQ5T7P2 110 aa5.12□□□□□ -1.59
COLCA2-202ENST00000526216 SPRR2EP22531 72 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 SPRR2BP35325 72 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 SPRR2AP35326 72 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
COLCA2-202ENST00000526216 KRTAP5-1Q6L8H4 278 aa5.09□□□□□ -1.59
COLCA2-202ENST00000526216 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
COLCA2-202ENST00000526216 MT1GP13640 62 aa5□□□□□ -1.61
COLCA2-202ENST00000526216 MT1MQ8N339 61 aa5□□□□□ -1.61
COLCA2-202ENST00000526216 KRTAP2-3P0C7H8 128 aa4.97□□□□□ -1.61
COLCA2-202ENST00000526216 KRTAP2-4Q9BYR9 128 aa4.97□□□□□ -1.61
COLCA2-202ENST00000526216 KRTAP4-4Q9BYR3 166 aa4.97□□□□□ -1.61
COLCA2-202ENST00000526216 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
COLCA2-202ENST00000526216 SPRR2DP22532 72 aa4.93□□□□□ -1.62
COLCA2-202ENST00000526216 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
COLCA2-202ENST00000526216 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
COLCA2-202ENST00000526216 GPR98Q8WXG9 6306 aa4.85□□□□□ -1.63
COLCA2-202ENST00000526216 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
COLCA2-202ENST00000526216 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
COLCA2-202ENST00000526216 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
COLCA2-202ENST00000526216 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
COLCA2-202ENST00000526216 DSTQ03001 7570 aaKnown RBP4.75□□□□□ -1.65
COLCA2-202ENST00000526216 KRTAP5-5Q701N2 237 aaPredicted RBP4.54□□□□□ -1.68
COLCA2-202ENST00000526216 MT1AP04731 61 aa4.38□□□□□ -1.71
COLCA2-202ENST00000526216 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
COLCA2-202ENST00000526216 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
COLCA2-202ENST00000526216 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
COLCA2-202ENST00000526216 KRTAP5-2Q701N4 177 aa4.32□□□□□ -1.72
COLCA2-202ENST00000526216 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
COLCA2-202ENST00000526216 MT4P47944 62 aa4.28□□□□□ -1.72
COLCA2-202ENST00000526216 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
COLCA2-202ENST00000526216 NDUFAF8A1L188 74 aa4.21□□□□□ -1.73
COLCA2-202ENST00000526216 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
COLCA2-202ENST00000526216 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
COLCA2-202ENST00000526216 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
COLCA2-202ENST00000526216 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
COLCA2-202ENST00000526216 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
COLCA2-202ENST00000526216 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
COLCA2-202ENST00000526216 KRTAP6-2Q3LI66 62 aa4.02□□□□□ -1.77
COLCA2-202ENST00000526216 MT3P25713 68 aa3.94□□□□□ -1.78
COLCA2-202ENST00000526216 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
COLCA2-202ENST00000526216 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
COLCA2-202ENST00000526216 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
COLCA2-202ENST00000526216 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
COLCA2-202ENST00000526216 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
COLCA2-202ENST00000526216 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
COLCA2-202ENST00000526216 INE1O15225 51 aa3.43□□□□□ -1.86
COLCA2-202ENST00000526216 LCE1BQ5T7P3 118 aa3.25□□□□□ -1.89
COLCA2-202ENST00000526216 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
COLCA2-202ENST00000526216 PRM1P04553 51 aa3.03□□□□□ -1.92
COLCA2-202ENST00000526216 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
COLCA2-202ENST00000526216 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
COLCA2-202ENST00000526216 MUC19Q7Z5P9 8384 aa2.72□□□□□ -1.97
COLCA2-202ENST00000526216 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
COLCA2-202ENST00000526216 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
COLCA2-202ENST00000526216 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 90.6 ms