RNA–Protein interactions for RNA: ENST00000526128.1

PUM1-217, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-217ENST00000526128 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
PUM1-217ENST00000526128 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
PUM1-217ENST00000526128 MT2AP02795 61 aa2.72□□□□□ -1.97
PUM1-217ENST00000526128 KRTAP5-9P26371 169 aa2.72□□□□□ -1.97
PUM1-217ENST00000526128 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
PUM1-217ENST00000526128 KRTAP5-4Q6L8H1 288 aa2.72□□□□□ -1.97
PUM1-217ENST00000526128 A0A0D9SG42 100 aa2.71□□□□□ -1.98
PUM1-217ENST00000526128 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
PUM1-217ENST00000526128 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
PUM1-217ENST00000526128 MT1FP04733 61 aa2.69□□□□□ -1.98
PUM1-217ENST00000526128 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
PUM1-217ENST00000526128 SYNE2Q8WXH0 6885 aaKnown RBP2.66□□□□□ -1.98
PUM1-217ENST00000526128 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
PUM1-217ENST00000526128 MUC12Q9UKN1 5478 aa2.6□□□□□ -1.99
PUM1-217ENST00000526128 KRTAP10-12P60413 245 aa2.57□□□□□ -2
PUM1-217ENST00000526128 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
PUM1-217ENST00000526128 NEBP20929 6669 aa2.53□□□□□ -2
PUM1-217ENST00000526128 KRTAP6-3Q3LI67 103 aa2.53□□□□□ -2
PUM1-217ENST00000526128 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
PUM1-217ENST00000526128 MDN1Q9NU22 5596 aa2.5□□□□□ -2.01
PUM1-217ENST00000526128 LCE3CQ5T5A8 94 aa2.5□□□□□ -2.01
PUM1-217ENST00000526128 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
PUM1-217ENST00000526128 MT1BP07438 61 aa2.46□□□□□ -2.02
PUM1-217ENST00000526128 TNP1P09430 55 aa2.46□□□□□ -2.02
PUM1-217ENST00000526128 KMT2DO14686 5537 aa2.46□□□□□ -2.02
PUM1-217ENST00000526128 SPRR2GQ9BYE4 73 aa2.45□□□□□ -2.02
PUM1-217ENST00000526128 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
PUM1-217ENST00000526128 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
PUM1-217ENST00000526128 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
PUM1-217ENST00000526128 KRTAP4-3Q9BYR4 195 aa2.37□□□□□ -2.03
PUM1-217ENST00000526128 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
PUM1-217ENST00000526128 KRTAP2-3P0C7H8 128 aa2.3□□□□□ -2.04
PUM1-217ENST00000526128 MT1XP80297 61 aa2.3□□□□□ -2.04
PUM1-217ENST00000526128 KRTAP2-4Q9BYR9 128 aa2.3□□□□□ -2.04
PUM1-217ENST00000526128 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
PUM1-217ENST00000526128 SPRR2FQ96RM1 72 aa2.27□□□□□ -2.05
PUM1-217ENST00000526128 KRTAP8-1Q8IUC2 63 aa2.25□□□□□ -2.05
PUM1-217ENST00000526128 SPRR2EP22531 72 aa2.24□□□□□ -2.05
PUM1-217ENST00000526128 SPRR2BP35325 72 aa2.24□□□□□ -2.05
PUM1-217ENST00000526128 SPRR2AP35326 72 aa2.24□□□□□ -2.05
PUM1-217ENST00000526128 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
PUM1-217ENST00000526128 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
PUM1-217ENST00000526128 SPRR2DP22532 72 aa2.17□□□□□ -2.06
PUM1-217ENST00000526128 LCE3AQ5TA76 89 aa2.09□□□□□ -2.07
PUM1-217ENST00000526128 DSTQ03001 7570 aaKnown RBP2.07□□□□□ -2.08
PUM1-217ENST00000526128 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
PUM1-217ENST00000526128 KRTAP19-7Q3SYF9 63 aa2.05□□□□□ -2.08
PUM1-217ENST00000526128 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
PUM1-217ENST00000526128 MT1EP04732 61 aa2.04□□□□□ -2.08
PUM1-217ENST00000526128 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
PUM1-217ENST00000526128 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
PUM1-217ENST00000526128 KRTAP19-5Q3LI72 72 aa2.01□□□□□ -2.09
PUM1-217ENST00000526128 MT1GP13640 62 aa1.97□□□□□ -2.09
PUM1-217ENST00000526128 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
PUM1-217ENST00000526128 MT1MQ8N339 61 aa1.95□□□□□ -2.1
PUM1-217ENST00000526128 MT1LQ93083 61 aa1.95□□□□□ -2.1
PUM1-217ENST00000526128 KRTAP5-5Q701N2 237 aaPredicted RBP1.94□□□□□ -2.1
PUM1-217ENST00000526128 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
PUM1-217ENST00000526128 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
PUM1-217ENST00000526128 MT4P47944 62 aa1.91□□□□□ -2.1
PUM1-217ENST00000526128 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
PUM1-217ENST00000526128 KRTAP12-4P60329 112 aa1.85□□□□□ -2.11
PUM1-217ENST00000526128 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
PUM1-217ENST00000526128 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
PUM1-217ENST00000526128 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
PUM1-217ENST00000526128 KRTAP20-2Q3LI61 65 aa1.76□□□□□ -2.13
PUM1-217ENST00000526128 MT1AP04731 61 aa1.74□□□□□ -2.13
PUM1-217ENST00000526128 MUC5BQ9HC84 5762 aaPredicted RBP1.7□□□□□ -2.14
PUM1-217ENST00000526128 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
PUM1-217ENST00000526128 MUC5ACP98088 5654 aa1.68□□□□□ -2.14
PUM1-217ENST00000526128 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
PUM1-217ENST00000526128 PRM1P04553 51 aa1.64□□□□□ -2.15
PUM1-217ENST00000526128 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
PUM1-217ENST00000526128 KRTAP6-2Q3LI66 62 aa1.59□□□□□ -2.15
PUM1-217ENST00000526128 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
PUM1-217ENST00000526128 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
PUM1-217ENST00000526128 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
PUM1-217ENST00000526128 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 5.9 ms