RNA–Protein interactions for RNA: ENST00000526001.1

CSF1-208, Transcript of colony stimulating factor 1, human

TSL 4

Gene CSF1, Length 573 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSF1-208	ENST00000526001	MT4	P47944	62 aa		4.34	□□□□□ -1.71
CSF1-208	ENST00000526001	LCE4A	Q5TA78	99 aa		4.34	□□□□□ -1.71
CSF1-208	ENST00000526001	PRR15L	Q9BU68	103 aa		4.33	□□□□□ -1.72
CSF1-208	ENST00000526001	LINC01558	Q9Y6Z2	57 aa		4.31	□□□□□ -1.72
CSF1-208	ENST00000526001	ATP5E	P56381	51 aa	Predicted RBP	4.3	□□□□□ -1.72
CSF1-208	ENST00000526001	KRTAP5-4	Q6L8H1	288 aa		4.27	□□□□□ -1.73
CSF1-208	ENST00000526001	KRTAP4-7	Q9BYR0	210 aa		4.26	□□□□□ -1.73
CSF1-208	ENST00000526001	KRTAP12-3	P60328	96 aa		4.24	□□□□□ -1.73
CSF1-208	ENST00000526001	HMCN1	Q96RW7	5635 aa		4.23	□□□□□ -1.73
CSF1-208	ENST00000526001	KRTAP4-6	Q9BYQ5	205 aa		4.22	□□□□□ -1.73
CSF1-208	ENST00000526001	UQCR11	O14957	56 aa		4.2	□□□□□ -1.74
CSF1-208	ENST00000526001		V9GYY9	64 aa		4.2	□□□□□ -1.74
CSF1-208	ENST00000526001	TMEM258	P61165	79 aa		4.17	□□□□□ -1.74
CSF1-208	ENST00000526001	RPS28	P62857	69 aa	Known RBP	4.12	□□□□□ -1.75
CSF1-208	ENST00000526001	AHNAK2	Q8IVF2	5795 aa		4.12	□□□□□ -1.75
CSF1-208	ENST00000526001	MIR22HG	Q0VDD5	57 aa		4.11	□□□□□ -1.75
CSF1-208	ENST00000526001	PRO0628	Q9UI54	55 aa		4.11	□□□□□ -1.75
CSF1-208	ENST00000526001	KRTAP25-1	Q3LHN0	102 aa		4.1	□□□□□ -1.75
CSF1-208	ENST00000526001	KRTAP5-10	Q6L8G5	202 aa		4.1	□□□□□ -1.75
CSF1-208	ENST00000526001	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.08	□□□□□ -1.76
CSF1-208	ENST00000526001	LOC100996750	A0A140TA64	210 aa		4.04	□□□□□ -1.76
CSF1-208	ENST00000526001	KRTAP20-2	Q3LI61	65 aa		4.04	□□□□□ -1.76
CSF1-208	ENST00000526001		K7ERS5	55 aa		4.01	□□□□□ -1.77
CSF1-208	ENST00000526001	PSPHP1	O15172	72 aa		4.01	□□□□□ -1.77
CSF1-208	ENST00000526001	KRTAP5-3	Q6L8H2	238 aa		4	□□□□□ -1.77
CSF1-208	ENST00000526001	SPRR5	A0A1B0GTR4	108 aa		3.98	□□□□□ -1.77
CSF1-208	ENST00000526001	KRTAP12-4	P60329	112 aa		3.95	□□□□□ -1.78
CSF1-208	ENST00000526001		Q1T7F1	81 aa		3.95	□□□□□ -1.78
CSF1-208	ENST00000526001	KRTAP5-7	Q6L8G8	165 aa		3.95	□□□□□ -1.78
CSF1-208	ENST00000526001	KRTAP15-1	Q3LI76	137 aa		3.94	□□□□□ -1.78
CSF1-208	ENST00000526001	KRTAP23-1	A1A580	65 aa		3.92	□□□□□ -1.78
CSF1-208	ENST00000526001	KRTAP19-4	Q3LI73	84 aa		3.92	□□□□□ -1.78
CSF1-208	ENST00000526001	PMAIP1	Q13794	54 aa		3.91	□□□□□ -1.78
CSF1-208	ENST00000526001	LCE3C	Q5T5A8	94 aa		3.9	□□□□□ -1.79
CSF1-208	ENST00000526001	SYNE1	Q8NF91	8797 aa	Known RBP	3.89	□□□□□ -1.79
CSF1-208	ENST00000526001	BRK1	Q8WUW1	75 aa		3.86	□□□□□ -1.79
CSF1-208	ENST00000526001		A6NED7	52 aa		3.85	□□□□□ -1.79
CSF1-208	ENST00000526001	CDC42SE1	Q9NRR8	79 aa		3.81	□□□□□ -1.8
CSF1-208	ENST00000526001		H3BS24	57 aa		3.79	□□□□□ -1.8
CSF1-208	ENST00000526001	MT1A	P04731	61 aa		3.77	□□□□□ -1.81
CSF1-208	ENST00000526001	KRTAP6-1	Q3LI64	71 aa		3.77	□□□□□ -1.81
CSF1-208	ENST00000526001	ROMO1	P60602	79 aa		3.76	□□□□□ -1.81
CSF1-208	ENST00000526001	KRTAP5-2	Q701N4	177 aa		3.73	□□□□□ -1.81
CSF1-208	ENST00000526001	KTN1-AS1	Q86SY8	53 aa		3.73	□□□□□ -1.81
CSF1-208	ENST00000526001	KRTAP9-6	A8MVA2	160 aa		3.72	□□□□□ -1.81
CSF1-208	ENST00000526001	KRTAP4-11	Q9BYQ6	195 aa		3.7	□□□□□ -1.82
CSF1-208	ENST00000526001	KRTAP9-4	Q9BYQ2	154 aa		3.66	□□□□□ -1.82
CSF1-208	ENST00000526001	KRTAP6-2	Q3LI66	62 aa		3.61	□□□□□ -1.83
CSF1-208	ENST00000526001	KRTAP5-8	O75690	187 aa		3.58	□□□□□ -1.84
CSF1-208	ENST00000526001		A0A0A0MQY5	61 aa		3.55	□□□□□ -1.84
CSF1-208	ENST00000526001	OBSCN	Q5VST9	7968 aa		3.47	□□□□□ -1.85
CSF1-208	ENST00000526001	MT3	P25713	68 aa		3.44	□□□□□ -1.86
CSF1-208	ENST00000526001	KRTAP9-9	Q9BYP9	154 aa		3.42	□□□□□ -1.86
CSF1-208	ENST00000526001	KRTAP4-12	Q9BQ66	201 aa		3.39	□□□□□ -1.87
CSF1-208	ENST00000526001	MUC5AC	P98088	5654 aa		3.38	□□□□□ -1.87
CSF1-208	ENST00000526001	KRTAP5-1	Q6L8H4	278 aa		3.36	□□□□□ -1.87
CSF1-208	ENST00000526001	AHNAK	Q09666	5890 aa	Known RBP	3.36	□□□□□ -1.87
CSF1-208	ENST00000526001	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.36	□□□□□ -1.87
CSF1-208	ENST00000526001	PRAC1	Q96KF2	57 aa		3.23	□□□□□ -1.89
CSF1-208	ENST00000526001	LUZP6	Q538Z0	58 aa		3.16	□□□□□ -1.9
CSF1-208	ENST00000526001	LCE1E	Q5T753	118 aa		3.16	□□□□□ -1.9
CSF1-208	ENST00000526001	KRTAP4-2	Q9BYR5	136 aa		3.15	□□□□□ -1.91
CSF1-208	ENST00000526001	LCE1B	Q5T7P3	118 aa		3.02	□□□□□ -1.93
CSF1-208	ENST00000526001	NDUFAF8	A1L188	74 aa		3.01	□□□□□ -1.93
CSF1-208	ENST00000526001	LCE1C	Q5T751	118 aa		2.94	□□□□□ -1.94
CSF1-208	ENST00000526001	LCE3D	Q9BYE3	92 aa		2.78	□□□□□ -1.96
CSF1-208	ENST00000526001	KRTAP5-11	Q6L8G4	156 aa		2.67	□□□□□ -1.98
CSF1-208	ENST00000526001	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.67	□□□□□ -1.98
CSF1-208	ENST00000526001	INE1	O15225	51 aa		2.64	□□□□□ -1.99
CSF1-208	ENST00000526001	LCE3E	Q5T5B0	92 aa		2.61	□□□□□ -1.99
CSF1-208	ENST00000526001	LCE1F	Q5T754	118 aa		2.6	□□□□□ -1.99
CSF1-208	ENST00000526001	KRTAP21-2	Q3LI59	83 aa		2.48	□□□□□ -2.01
CSF1-208	ENST00000526001	PHGR1	C9JFL3	82 aa		2.39	□□□□□ -2.03
CSF1-208	ENST00000526001	KRTAP4-4	Q9BYR3	166 aa		2.31	□□□□□ -2.04
CSF1-208	ENST00000526001	MUC19	Q7Z5P9	8384 aa		2.11	□□□□□ -2.07
CSF1-208	ENST00000526001	PRM1	P04553	51 aa		1.94	□□□□□ -2.1
CSF1-208	ENST00000526001	KRTAP21-1	Q3LI58	79 aa		1.8	□□□□□ -2.12
CSF1-208	ENST00000526001	MUC16	Q8WXI7	14507 aa		1.55	□□□□□ -2.16

Retrieved 78 of 20,778 RNA–protein pairs in 115 ms