RNA–Protein interactions for RNA: ENST00000525948.5

PUM1-215, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-215	ENST00000525948	DMAC1	Q96GE9	116 aa		4.42	□□□□□ -1.7
PUM1-215	ENST00000525948	KRTAP10-7	P60409	375 aa	Predicted RBP	4.4	□□□□□ -1.71
PUM1-215	ENST00000525948		A0A1B0GU69	56 aa		4.39	□□□□□ -1.71
PUM1-215	ENST00000525948	KRTAP8-1	Q8IUC2	63 aa		4.38	□□□□□ -1.71
PUM1-215	ENST00000525948		Q5W150	140 aa		4.37	□□□□□ -1.71
PUM1-215	ENST00000525948		P0C880	135 aa		4.35	□□□□□ -1.71
PUM1-215	ENST00000525948	ACYP2	P14621	99 aa		4.35	□□□□□ -1.71
PUM1-215	ENST00000525948		S4R3F8	94 aa		4.35	□□□□□ -1.71
PUM1-215	ENST00000525948	LUZP6	Q538Z0	58 aa		4.34	□□□□□ -1.71
PUM1-215	ENST00000525948	MT1X	P80297	61 aa		4.29	□□□□□ -1.72
PUM1-215	ENST00000525948	LCE1E	Q5T753	118 aa		4.27	□□□□□ -1.73
PUM1-215	ENST00000525948	PRO2289	Q9P1D8	64 aa		4.26	□□□□□ -1.73
PUM1-215	ENST00000525948	CRIPT	Q9P021	101 aa		4.25	□□□□□ -1.73
PUM1-215	ENST00000525948	NDUFAF8	A1L188	74 aa		4.24	□□□□□ -1.73
PUM1-215	ENST00000525948	KRTAP12-2	P59991	146 aa		4.24	□□□□□ -1.73
PUM1-215	ENST00000525948	SPINT4	Q6UDR6	99 aa		4.23	□□□□□ -1.73
PUM1-215	ENST00000525948	DST	Q03001	7570 aa	Known RBP	4.22	□□□□□ -1.73
PUM1-215	ENST00000525948	KRTAP5-11	Q6L8G4	156 aa		4.22	□□□□□ -1.73
PUM1-215	ENST00000525948	CAMK2N1	Q7Z7J9	78 aa		4.16	□□□□□ -1.74
PUM1-215	ENST00000525948	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.15	□□□□□ -1.75
PUM1-215	ENST00000525948	PLAC4	Q8WY50	150 aa		4.1	□□□□□ -1.75
PUM1-215	ENST00000525948		H0YAA0	97 aa		4.07	□□□□□ -1.76
PUM1-215	ENST00000525948	HMCN1	Q96RW7	5635 aa		4.05	□□□□□ -1.76
PUM1-215	ENST00000525948	KRTAP10-12	P60413	245 aa		4.05	□□□□□ -1.76
PUM1-215	ENST00000525948	AHNAK2	Q8IVF2	5795 aa		4.02	□□□□□ -1.77
PUM1-215	ENST00000525948		A0A1B0GU33	70 aa		3.97	□□□□□ -1.77
PUM1-215	ENST00000525948	KRTAP5-10	Q6L8G5	202 aa		3.95	□□□□□ -1.78
PUM1-215	ENST00000525948		R4GN34	69 aa		3.95	□□□□□ -1.78
PUM1-215	ENST00000525948		M0QZ58	72 aa		3.92	□□□□□ -1.78
PUM1-215	ENST00000525948	MT4	P47944	62 aa		3.92	□□□□□ -1.78
PUM1-215	ENST00000525948	LCE1F	Q5T754	118 aa		3.92	□□□□□ -1.78
PUM1-215	ENST00000525948	KRTAP19-3	Q7Z4W3	81 aa		3.87	□□□□□ -1.79
PUM1-215	ENST00000525948	KRTAP19-7	Q3SYF9	63 aa		3.84	□□□□□ -1.79
PUM1-215	ENST00000525948	KRTAP5-7	Q6L8G8	165 aa		3.84	□□□□□ -1.79
PUM1-215	ENST00000525948	MT1E	P04732	61 aa		3.83	□□□□□ -1.8
PUM1-215	ENST00000525948	KRTAP9-6	A8MVA2	160 aa		3.76	□□□□□ -1.81
PUM1-215	ENST00000525948	KRTAP5-4	Q6L8H1	288 aa		3.74	□□□□□ -1.81
PUM1-215	ENST00000525948	C10orf95	Q9H7T3	257 aa		3.72	□□□□□ -1.81
PUM1-215	ENST00000525948	SPRR5	A0A1B0GTR4	108 aa		3.71	□□□□□ -1.82
PUM1-215	ENST00000525948	KRTAP13-4	Q3LI77	160 aa		3.7	□□□□□ -1.82
PUM1-215	ENST00000525948	MT1G	P13640	62 aa		3.69	□□□□□ -1.82
PUM1-215	ENST00000525948	LCE3C	Q5T5A8	94 aa		3.69	□□□□□ -1.82
PUM1-215	ENST00000525948	MT1M	Q8N339	61 aa		3.68	□□□□□ -1.82
PUM1-215	ENST00000525948	INE1	O15225	51 aa		3.67	□□□□□ -1.82
PUM1-215	ENST00000525948	PP632	Q6XCG6	107 aa		3.66	□□□□□ -1.82
PUM1-215	ENST00000525948		A0A0D9SG42	100 aa		3.64	□□□□□ -1.83
PUM1-215	ENST00000525948	KRTAP4-3	Q9BYR4	195 aa		3.63	□□□□□ -1.83
PUM1-215	ENST00000525948	KRTAP19-5	Q3LI72	72 aa		3.62	□□□□□ -1.83
PUM1-215	ENST00000525948	KRTAP5-1	Q6L8H4	278 aa		3.62	□□□□□ -1.83
PUM1-215	ENST00000525948	KRTAP12-1	P59990	96 aa		3.58	□□□□□ -1.84
PUM1-215	ENST00000525948	MT1L	Q93083	61 aa		3.58	□□□□□ -1.84
PUM1-215	ENST00000525948	KRTAP20-2	Q3LI61	65 aa		3.57	□□□□□ -1.84
PUM1-215	ENST00000525948	KRTAP4-4	Q9BYR3	166 aa		3.43	□□□□□ -1.86
PUM1-215	ENST00000525948	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.42	□□□□□ -1.86
PUM1-215	ENST00000525948	KRTAP12-4	P60329	112 aa		3.38	□□□□□ -1.87
PUM1-215	ENST00000525948	AHNAK	Q09666	5890 aa	Known RBP	3.38	□□□□□ -1.87
PUM1-215	ENST00000525948	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.37	□□□□□ -1.87
PUM1-215	ENST00000525948	MUC5AC	P98088	5654 aa		3.37	□□□□□ -1.87
PUM1-215	ENST00000525948	SYNE1	Q8NF91	8797 aa	Known RBP	3.37	□□□□□ -1.87
PUM1-215	ENST00000525948	LCE3E	Q5T5B0	92 aa		3.36	□□□□□ -1.87
PUM1-215	ENST00000525948	LCE3A	Q5TA76	89 aa		3.34	□□□□□ -1.87
PUM1-215	ENST00000525948	TNP1	P09430	55 aa		3.3	□□□□□ -1.88
PUM1-215	ENST00000525948	KRTAP5-8	O75690	187 aa		3.28	□□□□□ -1.88
PUM1-215	ENST00000525948	KRTAP5-2	Q701N4	177 aa		3.21	□□□□□ -1.9
PUM1-215	ENST00000525948	KRTAP12-3	P60328	96 aa		3.18	□□□□□ -1.9
PUM1-215	ENST00000525948	OBSCN	Q5VST9	7968 aa		3.15	□□□□□ -1.9
PUM1-215	ENST00000525948	KRTAP6-1	Q3LI64	71 aa		3.06	□□□□□ -1.92
PUM1-215	ENST00000525948	MT1A	P04731	61 aa		3.03	□□□□□ -1.92
PUM1-215	ENST00000525948	KRTAP6-2	Q3LI66	62 aa		2.99	□□□□□ -1.93
PUM1-215	ENST00000525948	LCE1C	Q5T751	118 aa		2.8	□□□□□ -1.96
PUM1-215	ENST00000525948	LCE1B	Q5T7P3	118 aa		2.8	□□□□□ -1.96
PUM1-215	ENST00000525948	LCE3D	Q9BYE3	92 aa		2.71	□□□□□ -1.98
PUM1-215	ENST00000525948	PHGR1	C9JFL3	82 aa		2.32	□□□□□ -2.04
PUM1-215	ENST00000525948	MUC19	Q7Z5P9	8384 aa		2.2	□□□□□ -2.06
PUM1-215	ENST00000525948	PRM1	P04553	51 aa		2.15	□□□□□ -2.07
PUM1-215	ENST00000525948	KRTAP21-2	Q3LI59	83 aa		2.02	□□□□□ -2.09
PUM1-215	ENST00000525948	KRTAP21-1	Q3LI58	79 aa		1.74	□□□□□ -2.13
PUM1-215	ENST00000525948	MUC16	Q8WXI7	14507 aa		1.37	□□□□□ -2.19

Retrieved 78 of 20,778 RNA–protein pairs in 86.1 ms