RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
CHKA-203ENST00000525155 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
CHKA-203ENST00000525155 CDC42SE1Q9NRR8 79 aa4.67□□□□□ -1.66
CHKA-203ENST00000525155 KRTAP25-1Q3LHN0 102 aa4.6□□□□□ -1.67
CHKA-203ENST00000525155 KRTAP19-7Q3SYF9 63 aa4.58□□□□□ -1.68
CHKA-203ENST00000525155 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
CHKA-203ENST00000525155 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
CHKA-203ENST00000525155 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
CHKA-203ENST00000525155 GPR98Q8WXG9 6306 aa4.52□□□□□ -1.69
CHKA-203ENST00000525155 MT1EP04732 61 aa4.51□□□□□ -1.69
CHKA-203ENST00000525155 LCE3AQ5TA76 89 aa4.51□□□□□ -1.69
CHKA-203ENST00000525155 ROMO1P60602 79 aa4.5□□□□□ -1.69
CHKA-203ENST00000525155 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
CHKA-203ENST00000525155 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
CHKA-203ENST00000525155 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
CHKA-203ENST00000525155 KRTAP23-1A1A580 65 aa4.47□□□□□ -1.69
CHKA-203ENST00000525155 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
CHKA-203ENST00000525155 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
CHKA-203ENST00000525155 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
CHKA-203ENST00000525155 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
CHKA-203ENST00000525155 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
CHKA-203ENST00000525155 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
CHKA-203ENST00000525155 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
CHKA-203ENST00000525155 MT1GP13640 62 aa4.35□□□□□ -1.71
CHKA-203ENST00000525155 MT1LQ93083 61 aa4.32□□□□□ -1.72
CHKA-203ENST00000525155 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
CHKA-203ENST00000525155 MT1MQ8N339 61 aa4.3□□□□□ -1.72
CHKA-203ENST00000525155 MT4P47944 62 aa4.28□□□□□ -1.72
CHKA-203ENST00000525155 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
CHKA-203ENST00000525155 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
CHKA-203ENST00000525155 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
CHKA-203ENST00000525155 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
CHKA-203ENST00000525155 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
CHKA-203ENST00000525155 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
CHKA-203ENST00000525155 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
CHKA-203ENST00000525155 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
CHKA-203ENST00000525155 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
CHKA-203ENST00000525155 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
CHKA-203ENST00000525155 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
CHKA-203ENST00000525155 KRTAP5-7Q6L8G8 165 aa4.01□□□□□ -1.77
CHKA-203ENST00000525155 KRTAP5-5Q701N2 237 aaPredicted RBP4□□□□□ -1.77
CHKA-203ENST00000525155 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
CHKA-203ENST00000525155 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
CHKA-203ENST00000525155 SPRR5A0A1B0GTR4 108 aa3.9□□□□□ -1.79
CHKA-203ENST00000525155 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
CHKA-203ENST00000525155 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
CHKA-203ENST00000525155 A0A0A0MQY5 61 aa3.84□□□□□ -1.79
CHKA-203ENST00000525155 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
CHKA-203ENST00000525155 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
CHKA-203ENST00000525155 MT1AP04731 61 aa3.7□□□□□ -1.82
CHKA-203ENST00000525155 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
CHKA-203ENST00000525155 KRTAP6-1Q3LI64 71 aa3.65□□□□□ -1.83
CHKA-203ENST00000525155 KRTAP5-8O75690 187 aa3.59□□□□□ -1.83
CHKA-203ENST00000525155 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
CHKA-203ENST00000525155 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
CHKA-203ENST00000525155 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
CHKA-203ENST00000525155 MUC5ACP98088 5654 aa3.48□□□□□ -1.85
CHKA-203ENST00000525155 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
CHKA-203ENST00000525155 MT3P25713 68 aa3.41□□□□□ -1.86
CHKA-203ENST00000525155 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
CHKA-203ENST00000525155 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
CHKA-203ENST00000525155 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
CHKA-203ENST00000525155 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
CHKA-203ENST00000525155 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CHKA-203ENST00000525155 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CHKA-203ENST00000525155 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
CHKA-203ENST00000525155 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CHKA-203ENST00000525155 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
CHKA-203ENST00000525155 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
CHKA-203ENST00000525155 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
CHKA-203ENST00000525155 INE1O15225 51 aa2.47□□□□□ -2.01
CHKA-203ENST00000525155 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
CHKA-203ENST00000525155 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
CHKA-203ENST00000525155 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
CHKA-203ENST00000525155 PRM1P04553 51 aa2.28□□□□□ -2.04
CHKA-203ENST00000525155 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
CHKA-203ENST00000525155 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
CHKA-203ENST00000525155 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 20.6 ms