RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 KRTAP2-3P0C7H8 128 aa2.03□□□□□ -2.08
HMGB1P40-201ENST00000525121 KRTAP2-4Q9BYR9 128 aa2.03□□□□□ -2.08
HMGB1P40-201ENST00000525121 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
HMGB1P40-201ENST00000525121 MUC12Q9UKN1 5478 aa2□□□□□ -2.09
HMGB1P40-201ENST00000525121 MT1EP04732 61 aa2□□□□□ -2.09
HMGB1P40-201ENST00000525121 KRTAP19-5Q3LI72 72 aa2□□□□□ -2.09
HMGB1P40-201ENST00000525121 KRTAP19-7Q3SYF9 63 aa2□□□□□ -2.09
HMGB1P40-201ENST00000525121 LCE3AQ5TA76 89 aa2□□□□□ -2.09
HMGB1P40-201ENST00000525121 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
HMGB1P40-201ENST00000525121 MDN1Q9NU22 5596 aa1.97□□□□□ -2.09
HMGB1P40-201ENST00000525121 ROMO1P60602 79 aa1.97□□□□□ -2.09
HMGB1P40-201ENST00000525121 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
HMGB1P40-201ENST00000525121 LCE3BQ5TA77 95 aa1.96□□□□□ -2.1
HMGB1P40-201ENST00000525121 PRAC1Q96KF2 57 aa1.96□□□□□ -2.1
HMGB1P40-201ENST00000525121 KRTAP2-2Q9BYT5 123 aa1.96□□□□□ -2.1
HMGB1P40-201ENST00000525121 KRTAP2-1Q9BYU5 128 aa1.96□□□□□ -2.1
HMGB1P40-201ENST00000525121 LCE5AQ5TCM9 118 aa1.95□□□□□ -2.1
HMGB1P40-201ENST00000525121 MT1GP13640 62 aa1.94□□□□□ -2.1
HMGB1P40-201ENST00000525121 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
HMGB1P40-201ENST00000525121 KRTAP15-1Q3LI76 137 aa1.92□□□□□ -2.1
HMGB1P40-201ENST00000525121 MT1LQ93083 61 aa1.92□□□□□ -2.1
HMGB1P40-201ENST00000525121 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
HMGB1P40-201ENST00000525121 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
HMGB1P40-201ENST00000525121 MT1MQ8N339 61 aa1.9□□□□□ -2.11
HMGB1P40-201ENST00000525121 LCE4AQ5TA78 99 aa1.86□□□□□ -2.11
HMGB1P40-201ENST00000525121 KRTAP9-4Q9BYQ2 154 aa1.86□□□□□ -2.11
HMGB1P40-201ENST00000525121 KRTAP9-9Q9BYP9 154 aa1.85□□□□□ -2.11
HMGB1P40-201ENST00000525121 KRTAP4-3Q9BYR4 195 aa1.82□□□□□ -2.12
HMGB1P40-201ENST00000525121 DSTQ03001 7570 aaKnown RBP1.81□□□□□ -2.12
HMGB1P40-201ENST00000525121 NDUFAF8A1L188 74 aa1.81□□□□□ -2.12
HMGB1P40-201ENST00000525121 LCE1DQ5T752 114 aa1.8□□□□□ -2.12
HMGB1P40-201ENST00000525121 KRTAP4-7Q9BYR0 210 aa1.8□□□□□ -2.12
HMGB1P40-201ENST00000525121 LCE3CQ5T5A8 94 aa1.79□□□□□ -2.12
HMGB1P40-201ENST00000525121 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
HMGB1P40-201ENST00000525121 MT4P47944 62 aa1.76□□□□□ -2.13
HMGB1P40-201ENST00000525121 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
HMGB1P40-201ENST00000525121 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
HMGB1P40-201ENST00000525121 KRTAP5-5Q701N2 237 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P40-201ENST00000525121 SPRR5A0A1B0GTR4 108 aa1.67□□□□□ -2.14
HMGB1P40-201ENST00000525121 KRTAP4-11Q9BYQ6 195 aa1.67□□□□□ -2.14
HMGB1P40-201ENST00000525121 KRTAP4-2Q9BYR5 136 aa1.66□□□□□ -2.14
HMGB1P40-201ENST00000525121 MT1AP04731 61 aa1.65□□□□□ -2.15
HMGB1P40-201ENST00000525121 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
HMGB1P40-201ENST00000525121 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
HMGB1P40-201ENST00000525121 KRTAP9-6A8MVA2 160 aa1.63□□□□□ -2.15
HMGB1P40-201ENST00000525121 GPR98Q8WXG9 6306 aa1.62□□□□□ -2.15
HMGB1P40-201ENST00000525121 KRTAP6-1Q3LI64 71 aa1.61□□□□□ -2.15
HMGB1P40-201ENST00000525121 INE1O15225 51 aa1.58□□□□□ -2.16
HMGB1P40-201ENST00000525121 KRTAP5-3Q6L8H2 238 aa1.58□□□□□ -2.16
HMGB1P40-201ENST00000525121 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
HMGB1P40-201ENST00000525121 MT3P25713 68 aa1.55□□□□□ -2.16
HMGB1P40-201ENST00000525121 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
HMGB1P40-201ENST00000525121 KRTAP6-2Q3LI66 62 aa1.54□□□□□ -2.16
HMGB1P40-201ENST00000525121 KRTAP5-2Q701N4 177 aa1.54□□□□□ -2.16
HMGB1P40-201ENST00000525121 SYNE1Q8NF91 8797 aaKnown RBP1.53□□□□□ -2.16
HMGB1P40-201ENST00000525121 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
HMGB1P40-201ENST00000525121 LCE1FQ5T754 118 aa1.43□□□□□ -2.18
HMGB1P40-201ENST00000525121 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
HMGB1P40-201ENST00000525121 LCE1EQ5T753 118 aa1.37□□□□□ -2.19
HMGB1P40-201ENST00000525121 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
HMGB1P40-201ENST00000525121 KRTAP5-1Q6L8H4 278 aa1.36□□□□□ -2.19
HMGB1P40-201ENST00000525121 LCE3DQ9BYE3 92 aa1.32□□□□□ -2.2
HMGB1P40-201ENST00000525121 LCE1BQ5T7P3 118 aa1.29□□□□□ -2.2
HMGB1P40-201ENST00000525121 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
HMGB1P40-201ENST00000525121 LCE1CQ5T751 118 aa1.26□□□□□ -2.21
HMGB1P40-201ENST00000525121 LCE3EQ5T5B0 92 aa1.25□□□□□ -2.21
HMGB1P40-201ENST00000525121 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
HMGB1P40-201ENST00000525121 MUC5BQ9HC84 5762 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P40-201ENST00000525121 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P40-201ENST00000525121 KRTAP5-11Q6L8G4 156 aa1.14□□□□□ -2.23
HMGB1P40-201ENST00000525121 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
HMGB1P40-201ENST00000525121 PRM1P04553 51 aa0.98□□□□□ -2.25
HMGB1P40-201ENST00000525121 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
HMGB1P40-201ENST00000525121 KRTAP4-4Q9BYR3 166 aa0.96□□□□□ -2.26
HMGB1P40-201ENST00000525121 MUC19Q7Z5P9 8384 aa0.83□□□□□ -2.28
HMGB1P40-201ENST00000525121 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
HMGB1P40-201ENST00000525121 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 71 ms