RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
SF3B2-202ENST00000524475 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
SF3B2-202ENST00000524475 KRTAP25-1Q3LHN0 102 aa5.5□□□□□ -1.53
SF3B2-202ENST00000524475 KRTAP2-2Q9BYT5 123 aa5.48□□□□□ -1.53
SF3B2-202ENST00000524475 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
SF3B2-202ENST00000524475 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
SF3B2-202ENST00000524475 MT1GP13640 62 aa5.44□□□□□ -1.54
SF3B2-202ENST00000524475 MT1LQ93083 61 aa5.4□□□□□ -1.54
SF3B2-202ENST00000524475 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
SF3B2-202ENST00000524475 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
SF3B2-202ENST00000524475 KRTAP12-3P60328 96 aa5.36□□□□□ -1.55
SF3B2-202ENST00000524475 PMAIP1Q13794 54 aa5.35□□□□□ -1.55
SF3B2-202ENST00000524475 MT1MQ8N339 61 aa5.32□□□□□ -1.56
SF3B2-202ENST00000524475 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
SF3B2-202ENST00000524475 ROMO1P60602 79 aa5.27□□□□□ -1.57
SF3B2-202ENST00000524475 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
SF3B2-202ENST00000524475 KRTAP19-4Q3LI73 84 aa5.19□□□□□ -1.58
SF3B2-202ENST00000524475 KTN1-AS1Q86SY8 53 aa5.16□□□□□ -1.58
SF3B2-202ENST00000524475 KRTAP4-3Q9BYR4 195 aa5.12□□□□□ -1.59
SF3B2-202ENST00000524475 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
SF3B2-202ENST00000524475 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
SF3B2-202ENST00000524475 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
SF3B2-202ENST00000524475 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
SF3B2-202ENST00000524475 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
SF3B2-202ENST00000524475 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
SF3B2-202ENST00000524475 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
SF3B2-202ENST00000524475 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
SF3B2-202ENST00000524475 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
SF3B2-202ENST00000524475 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
SF3B2-202ENST00000524475 MT4P47944 62 aa4.84□□□□□ -1.63
SF3B2-202ENST00000524475 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
SF3B2-202ENST00000524475 KRTAP4-6Q9BYQ5 205 aa4.76□□□□□ -1.65
SF3B2-202ENST00000524475 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
SF3B2-202ENST00000524475 KRTAP12-4P60329 112 aa4.69□□□□□ -1.66
SF3B2-202ENST00000524475 AHNAK2Q8IVF2 5795 aa4.66□□□□□ -1.66
SF3B2-202ENST00000524475 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
SF3B2-202ENST00000524475 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
SF3B2-202ENST00000524475 GPR98Q8WXG9 6306 aa4.65□□□□□ -1.67
SF3B2-202ENST00000524475 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
SF3B2-202ENST00000524475 MT1AP04731 61 aa4.61□□□□□ -1.67
SF3B2-202ENST00000524475 KRTAP6-1Q3LI64 71 aa4.54□□□□□ -1.68
SF3B2-202ENST00000524475 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
SF3B2-202ENST00000524475 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
SF3B2-202ENST00000524475 KRTAP5-2Q701N4 177 aa4.42□□□□□ -1.7
SF3B2-202ENST00000524475 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
SF3B2-202ENST00000524475 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
SF3B2-202ENST00000524475 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
SF3B2-202ENST00000524475 MT3P25713 68 aa4.21□□□□□ -1.74
SF3B2-202ENST00000524475 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
SF3B2-202ENST00000524475 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
SF3B2-202ENST00000524475 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
SF3B2-202ENST00000524475 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
SF3B2-202ENST00000524475 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SF3B2-202ENST00000524475 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
SF3B2-202ENST00000524475 KRTAP5-1Q6L8H4 278 aa3.9□□□□□ -1.79
SF3B2-202ENST00000524475 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
SF3B2-202ENST00000524475 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
SF3B2-202ENST00000524475 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
SF3B2-202ENST00000524475 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
SF3B2-202ENST00000524475 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
SF3B2-202ENST00000524475 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
SF3B2-202ENST00000524475 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
SF3B2-202ENST00000524475 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
SF3B2-202ENST00000524475 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
SF3B2-202ENST00000524475 H3BS24 57 aa3.55□□□□□ -1.84
SF3B2-202ENST00000524475 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SF3B2-202ENST00000524475 INE1O15225 51 aa3.44□□□□□ -1.86
SF3B2-202ENST00000524475 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
SF3B2-202ENST00000524475 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
SF3B2-202ENST00000524475 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SF3B2-202ENST00000524475 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
SF3B2-202ENST00000524475 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
SF3B2-202ENST00000524475 PHGR1C9JFL3 82 aa2.75□□□□□ -1.97
SF3B2-202ENST00000524475 PRM1P04553 51 aa2.68□□□□□ -1.98
SF3B2-202ENST00000524475 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
SF3B2-202ENST00000524475 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
SF3B2-202ENST00000524475 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
SF3B2-202ENST00000524475 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms