RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 KRTAP19-8Q3LI54 63 aa1.04□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
PCM1-222ENST00000524226 KRTAP4-8A0A0G2JLE6 195 aa1.02□□□□□ -2.25
PCM1-222ENST00000524226 KRTAP9-3Q9BYQ3 159 aa1.02□□□□□ -2.25
PCM1-222ENST00000524226 KRTAP4-7Q9BYR0 210 aa1.01□□□□□ -2.25
PCM1-222ENST00000524226 FAT4Q6V0I7 4981 aa1.01□□□□□ -2.25
PCM1-222ENST00000524226 MT1BP07438 61 aa1.01□□□□□ -2.25
PCM1-222ENST00000524226 UBR4Q5T4S7 5183 aa1□□□□□ -2.25
PCM1-222ENST00000524226 MUC2Q02817 5179 aa1□□□□□ -2.25
PCM1-222ENST00000524226 KRTAP4-12Q9BQ66 201 aa1□□□□□ -2.25
PCM1-222ENST00000524226 MT1XP80297 61 aa1□□□□□ -2.25
PCM1-222ENST00000524226 SPRR5A0A1B0GTR4 108 aa0.99□□□□□ -2.25
PCM1-222ENST00000524226 KRTAP12-4P60329 112 aa0.98□□□□□ -2.25
PCM1-222ENST00000524226 LCE3CQ5T5A8 94 aa0.97□□□□□ -2.25
PCM1-222ENST00000524226 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
PCM1-222ENST00000524226 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
PCM1-222ENST00000524226 KRTAP19-5Q3LI72 72 aa0.94□□□□□ -2.26
PCM1-222ENST00000524226 KRTAP6-3Q3LI67 103 aa0.93□□□□□ -2.26
PCM1-222ENST00000524226 KRTAP19-6Q3LI70 58 aa0.93□□□□□ -2.26
PCM1-222ENST00000524226 KRTAP4-9Q9BYQ8 210 aa0.93□□□□□ -2.26
PCM1-222ENST00000524226 MT4P47944 62 aa0.92□□□□□ -2.26
PCM1-222ENST00000524226 SSPOA2VEC9 5147 aa0.91□□□□□ -2.26
PCM1-222ENST00000524226 MT1GP13640 62 aa0.9□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP2-2Q9BYT5 123 aa0.89□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
PCM1-222ENST00000524226 LCE3EQ5T5B0 92 aa0.89□□□□□ -2.27
PCM1-222ENST00000524226 LCE3DQ9BYE3 92 aa0.89□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP5-9P26371 169 aa0.89□□□□□ -2.27
PCM1-222ENST00000524226 MT1EP04732 61 aa0.88□□□□□ -2.27
PCM1-222ENST00000524226 HMCN1Q96RW7 5635 aa0.88□□□□□ -2.27
PCM1-222ENST00000524226 USH2AO75445 5202 aa0.87□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP5-4Q6L8H1 288 aa0.87□□□□□ -2.27
PCM1-222ENST00000524226 MT1LQ93083 61 aa0.87□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP19-7Q3SYF9 63 aa0.87□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
PCM1-222ENST00000524226 KRTAP4-4Q9BYR3 166 aa0.84□□□□□ -2.28
PCM1-222ENST00000524226 MT1MQ8N339 61 aa0.83□□□□□ -2.28
PCM1-222ENST00000524226 LCE1AQ5T7P2 110 aa0.83□□□□□ -2.28
PCM1-222ENST00000524226 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
PCM1-222ENST00000524226 KRTAP4-11Q9BYQ6 195 aa0.82□□□□□ -2.28
PCM1-222ENST00000524226 KMT2DO14686 5537 aa0.8□□□□□ -2.28
PCM1-222ENST00000524226 LCE5AQ5TCM9 118 aa0.8□□□□□ -2.28
PCM1-222ENST00000524226 LCE1DQ5T752 114 aa0.8□□□□□ -2.28
PCM1-222ENST00000524226 KRTAP4-3Q9BYR4 195 aa0.8□□□□□ -2.28
PCM1-222ENST00000524226 LCE1BQ5T7P3 118 aa0.8□□□□□ -2.28
PCM1-222ENST00000524226 SYNE2Q8WXH0 6885 aaKnown RBP0.79□□□□□ -2.28
PCM1-222ENST00000524226 KRTAP9-6A8MVA2 160 aa0.79□□□□□ -2.28
PCM1-222ENST00000524226 NEBP20929 6669 aa0.78□□□□□ -2.28
PCM1-222ENST00000524226 FCGBPQ9Y6R7 5405 aaPredicted RBP0.78□□□□□ -2.28
PCM1-222ENST00000524226 PRM1P04553 51 aa0.78□□□□□ -2.28
PCM1-222ENST00000524226 FSIP2Q5CZC0 6907 aa0.78□□□□□ -2.28
PCM1-222ENST00000524226 KRTAP5-5Q701N2 237 aaPredicted RBP0.77□□□□□ -2.29
PCM1-222ENST00000524226 MACF1Q9UPN3 7388 aaKnown RBP0.76□□□□□ -2.29
PCM1-222ENST00000524226 MT1AP04731 61 aa0.75□□□□□ -2.29
PCM1-222ENST00000524226 LCE1CQ5T751 118 aa0.75□□□□□ -2.29
PCM1-222ENST00000524226 LCE1EQ5T753 118 aa0.75□□□□□ -2.29
PCM1-222ENST00000524226 LCE1FQ5T754 118 aa0.75□□□□□ -2.29
PCM1-222ENST00000524226 KRTAP5-7Q6L8G8 165 aa0.75□□□□□ -2.29
PCM1-222ENST00000524226 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
PCM1-222ENST00000524226 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
PCM1-222ENST00000524226 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
PCM1-222ENST00000524226 KRTAP5-1Q6L8H4 278 aa0.71□□□□□ -2.3
PCM1-222ENST00000524226 MUC12Q9UKN1 5478 aa0.71□□□□□ -2.3
PCM1-222ENST00000524226 MDN1Q9NU22 5596 aa0.7□□□□□ -2.3
PCM1-222ENST00000524226 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
PCM1-222ENST00000524226 KRTAP5-8O75690 187 aa0.7□□□□□ -2.3
PCM1-222ENST00000524226 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
PCM1-222ENST00000524226 KRTAP6-2Q3LI66 62 aa0.68□□□□□ -2.3
PCM1-222ENST00000524226 DSTQ03001 7570 aaKnown RBP0.68□□□□□ -2.3
PCM1-222ENST00000524226 MUC19Q7Z5P9 8384 aa0.65□□□□□ -2.31
PCM1-222ENST00000524226 AHNAK2Q8IVF2 5795 aa0.64□□□□□ -2.31
PCM1-222ENST00000524226 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
PCM1-222ENST00000524226 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
PCM1-222ENST00000524226 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
PCM1-222ENST00000524226 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
PCM1-222ENST00000524226 KRTAP21-2Q3LI59 83 aa0.45□□□□□ -2.34
PCM1-222ENST00000524226 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 66.7 ms