RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	SPINT4	Q6UDR6	99 aa		4.35	□□□□□ -1.71
SORBS3-222	ENST00000524057	HMCN1	Q96RW7	5635 aa		4.33	□□□□□ -1.72
SORBS3-222	ENST00000524057	LCE1D	Q5T752	114 aa		4.32	□□□□□ -1.72
SORBS3-222	ENST00000524057	PLAC4	Q8WY50	150 aa		4.32	□□□□□ -1.72
SORBS3-222	ENST00000524057	KRTAP12-1	P59990	96 aa		4.31	□□□□□ -1.72
SORBS3-222	ENST00000524057	AHNAK2	Q8IVF2	5795 aa		4.3	□□□□□ -1.72
SORBS3-222	ENST00000524057	KRTAP5-10	Q6L8G5	202 aa		4.29	□□□□□ -1.72
SORBS3-222	ENST00000524057	KRTAP10-7	P60409	375 aa	Predicted RBP	4.27	□□□□□ -1.73
SORBS3-222	ENST00000524057	CAMK2N1	Q7Z7J9	78 aa		4.26	□□□□□ -1.73
SORBS3-222	ENST00000524057	KRTAP10-12	P60413	245 aa		4.24	□□□□□ -1.73
SORBS3-222	ENST00000524057	MT4	P47944	62 aa		4.2	□□□□□ -1.74
SORBS3-222	ENST00000524057	KRTAP5-7	Q6L8G8	165 aa		4.19	□□□□□ -1.74
SORBS3-222	ENST00000524057	LCE5A	Q5TCM9	118 aa		4.17	□□□□□ -1.74
SORBS3-222	ENST00000524057	LCE4A	Q5TA78	99 aa		4.15	□□□□□ -1.75
SORBS3-222	ENST00000524057	PP632	Q6XCG6	107 aa		4.11	□□□□□ -1.75
SORBS3-222	ENST00000524057		H3BS24	57 aa		4.09	□□□□□ -1.75
SORBS3-222	ENST00000524057	C10orf95	Q9H7T3	257 aa		4.08	□□□□□ -1.76
SORBS3-222	ENST00000524057	SPRR5	A0A1B0GTR4	108 aa		4.07	□□□□□ -1.76
SORBS3-222	ENST00000524057	KRTAP19-3	Q7Z4W3	81 aa		4.07	□□□□□ -1.76
SORBS3-222	ENST00000524057	KRTAP15-1	Q3LI76	137 aa		4.06	□□□□□ -1.76
SORBS3-222	ENST00000524057	KRTAP5-3	Q6L8H2	238 aa		4.06	□□□□□ -1.76
SORBS3-222	ENST00000524057	KRTAP4-6	Q9BYQ5	205 aa		4.05	□□□□□ -1.76
SORBS3-222	ENST00000524057	KRTAP23-1	A1A580	65 aa		4.02	□□□□□ -1.77
SORBS3-222	ENST00000524057	TNP1	P09430	55 aa		4.02	□□□□□ -1.77
SORBS3-222	ENST00000524057	KRTAP19-7	Q3SYF9	63 aa		4.02	□□□□□ -1.77
SORBS3-222	ENST00000524057	MT1E	P04732	61 aa		3.99	□□□□□ -1.77
SORBS3-222	ENST00000524057	KRTAP5-4	Q6L8H1	288 aa		3.99	□□□□□ -1.77
SORBS3-222	ENST00000524057	MT1G	P13640	62 aa		3.92	□□□□□ -1.78
SORBS3-222	ENST00000524057	NDUFAF8	A1L188	74 aa		3.9	□□□□□ -1.79
SORBS3-222	ENST00000524057	KRTAP19-5	Q3LI72	72 aa		3.89	□□□□□ -1.79
SORBS3-222	ENST00000524057	LUZP6	Q538Z0	58 aa		3.84	□□□□□ -1.79
SORBS3-222	ENST00000524057	LCE3A	Q5TA76	89 aa		3.84	□□□□□ -1.79
SORBS3-222	ENST00000524057	MT1M	Q8N339	61 aa		3.84	□□□□□ -1.79
SORBS3-222	ENST00000524057	KRTAP4-3	Q9BYR4	195 aa		3.81	□□□□□ -1.8
SORBS3-222	ENST00000524057	KRTAP20-2	Q3LI61	65 aa		3.8	□□□□□ -1.8
SORBS3-222	ENST00000524057	MT1L	Q93083	61 aa		3.78	□□□□□ -1.8
SORBS3-222	ENST00000524057	AHNAK	Q09666	5890 aa	Known RBP	3.7	□□□□□ -1.82
SORBS3-222	ENST00000524057	KRTAP12-3	P60328	96 aa		3.69	□□□□□ -1.82
SORBS3-222	ENST00000524057		A0A0A0MQY5	61 aa		3.68	□□□□□ -1.82
SORBS3-222	ENST00000524057	KRTAP4-7	Q9BYR0	210 aa		3.67	□□□□□ -1.82
SORBS3-222	ENST00000524057	MUC5AC	P98088	5654 aa		3.66	□□□□□ -1.82
SORBS3-222	ENST00000524057	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.63	□□□□□ -1.83
SORBS3-222	ENST00000524057	KRTAP12-4	P60329	112 aa		3.61	□□□□□ -1.83
SORBS3-222	ENST00000524057	KRTAP4-11	Q9BYQ6	195 aa		3.61	□□□□□ -1.83
SORBS3-222	ENST00000524057	SYNE1	Q8NF91	8797 aa	Known RBP	3.6	□□□□□ -1.83
SORBS3-222	ENST00000524057	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.59	□□□□□ -1.83
SORBS3-222	ENST00000524057	KRTAP5-8	O75690	187 aa		3.54	□□□□□ -1.84
SORBS3-222	ENST00000524057	KRTAP19-4	Q3LI73	84 aa		3.49	□□□□□ -1.85
SORBS3-222	ENST00000524057	LOC100996750	A0A140TA64	210 aa		3.46	□□□□□ -1.86
SORBS3-222	ENST00000524057	LCE3C	Q5T5A8	94 aa		3.44	□□□□□ -1.86
SORBS3-222	ENST00000524057	KRTAP9-9	Q9BYP9	154 aa		3.4	□□□□□ -1.87
SORBS3-222	ENST00000524057	INE1	O15225	51 aa		3.39	□□□□□ -1.87
SORBS3-222	ENST00000524057	KRTAP5-2	Q701N4	177 aa		3.39	□□□□□ -1.87
SORBS3-222	ENST00000524057	OBSCN	Q5VST9	7968 aa		3.35	□□□□□ -1.87
SORBS3-222	ENST00000524057	KRTAP9-6	A8MVA2	160 aa		3.33	□□□□□ -1.88
SORBS3-222	ENST00000524057	KRTAP6-1	Q3LI64	71 aa		3.21	□□□□□ -1.9
SORBS3-222	ENST00000524057	MT1A	P04731	61 aa		3.19	□□□□□ -1.9
SORBS3-222	ENST00000524057	KRTAP5-1	Q6L8H4	278 aa		3.16	□□□□□ -1.9
SORBS3-222	ENST00000524057	KRTAP9-4	Q9BYQ2	154 aa		3.16	□□□□□ -1.9
SORBS3-222	ENST00000524057	KRTAP6-2	Q3LI66	62 aa		3.15	□□□□□ -1.91
SORBS3-222	ENST00000524057	MT3	P25713	68 aa		2.91	□□□□□ -1.94
SORBS3-222	ENST00000524057	LCE1E	Q5T753	118 aa		2.81	□□□□□ -1.96
SORBS3-222	ENST00000524057	KRTAP4-2	Q9BYR5	136 aa		2.72	□□□□□ -1.97
SORBS3-222	ENST00000524057	LCE1B	Q5T7P3	118 aa		2.7	□□□□□ -1.98
SORBS3-222	ENST00000524057	KRTAP4-12	Q9BQ66	201 aa		2.69	□□□□□ -1.98
SORBS3-222	ENST00000524057	LCE1C	Q5T751	118 aa		2.61	□□□□□ -1.99
SORBS3-222	ENST00000524057	LCE3D	Q9BYE3	92 aa		2.58	□□□□□ -2
SORBS3-222	ENST00000524057	KRTAP5-11	Q6L8G4	156 aa		2.53	□□□□□ -2
SORBS3-222	ENST00000524057	PHGR1	C9JFL3	82 aa		2.52	□□□□□ -2.01
SORBS3-222	ENST00000524057	LCE3E	Q5T5B0	92 aa		2.51	□□□□□ -2.01
SORBS3-222	ENST00000524057	LCE1F	Q5T754	118 aa		2.47	□□□□□ -2.01
SORBS3-222	ENST00000524057	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.3	□□□□□ -2.04
SORBS3-222	ENST00000524057	PRM1	P04553	51 aa		2.29	□□□□□ -2.04
SORBS3-222	ENST00000524057	KRTAP21-2	Q3LI59	83 aa		2.14	□□□□□ -2.07
SORBS3-222	ENST00000524057	MUC19	Q7Z5P9	8384 aa		2.12	□□□□□ -2.07
SORBS3-222	ENST00000524057	KRTAP4-4	Q9BYR3	166 aa		2.04	□□□□□ -2.08
SORBS3-222	ENST00000524057	KRTAP21-1	Q3LI58	79 aa		1.9	□□□□□ -2.11
SORBS3-222	ENST00000524057	MUC16	Q8WXI7	14507 aa		1.45	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 70.4 ms