RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 KRTAP10-5P60370 271 aa1.54□□□□□ -2.16
HDAC2-215ENST00000523334 KRTAP8-1Q8IUC2 63 aa1.53□□□□□ -2.16
HDAC2-215ENST00000523334 LCE5AQ5TCM9 118 aa1.51□□□□□ -2.17
HDAC2-215ENST00000523334 KRTAP10-7P60409 375 aaPredicted RBP1.51□□□□□ -2.17
HDAC2-215ENST00000523334 KRTAP19-5Q3LI72 72 aa1.47□□□□□ -2.17
HDAC2-215ENST00000523334 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
HDAC2-215ENST00000523334 SPRR5A0A1B0GTR4 108 aa1.42□□□□□ -2.18
HDAC2-215ENST00000523334 USH2AO75445 5202 aa1.42□□□□□ -2.18
HDAC2-215ENST00000523334 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
HDAC2-215ENST00000523334 LCE3CQ5T5A8 94 aa1.41□□□□□ -2.18
HDAC2-215ENST00000523334 KRTAP5-9P26371 169 aa1.41□□□□□ -2.18
HDAC2-215ENST00000523334 KRTAP19-4Q3LI73 84 aa1.41□□□□□ -2.18
HDAC2-215ENST00000523334 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
HDAC2-215ENST00000523334 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
HDAC2-215ENST00000523334 MT1EP04732 61 aa1.36□□□□□ -2.19
HDAC2-215ENST00000523334 HMCN1Q96RW7 5635 aa1.36□□□□□ -2.19
HDAC2-215ENST00000523334 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
HDAC2-215ENST00000523334 MT1LQ93083 61 aa1.35□□□□□ -2.19
HDAC2-215ENST00000523334 SSPOA2VEC9 5147 aa1.35□□□□□ -2.19
HDAC2-215ENST00000523334 MT1GP13640 62 aa1.34□□□□□ -2.2
HDAC2-215ENST00000523334 KMT2DO14686 5537 aa1.33□□□□□ -2.2
HDAC2-215ENST00000523334 INE1O15225 51 aa1.32□□□□□ -2.2
HDAC2-215ENST00000523334 KRTAP19-3Q7Z4W3 81 aa1.32□□□□□ -2.2
HDAC2-215ENST00000523334 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
HDAC2-215ENST00000523334 MT1MQ8N339 61 aa1.29□□□□□ -2.2
HDAC2-215ENST00000523334 SPRR2EP22531 72 aa1.28□□□□□ -2.21
HDAC2-215ENST00000523334 SPRR2BP35325 72 aa1.28□□□□□ -2.21
HDAC2-215ENST00000523334 SPRR2AP35326 72 aa1.28□□□□□ -2.21
HDAC2-215ENST00000523334 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
HDAC2-215ENST00000523334 KRTAP9-6A8MVA2 160 aa1.26□□□□□ -2.21
HDAC2-215ENST00000523334 MUC12Q9UKN1 5478 aa1.26□□□□□ -2.21
HDAC2-215ENST00000523334 KRTAP5-11Q6L8G4 156 aa1.24□□□□□ -2.21
HDAC2-215ENST00000523334 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
HDAC2-215ENST00000523334 KRTAP5-4Q6L8H1 288 aa1.23□□□□□ -2.21
HDAC2-215ENST00000523334 SPRR2DP22532 72 aa1.23□□□□□ -2.21
HDAC2-215ENST00000523334 SYNE1Q8NF91 8797 aaKnown RBP1.23□□□□□ -2.21
HDAC2-215ENST00000523334 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
HDAC2-215ENST00000523334 MUC5BQ9HC84 5762 aaPredicted RBP1.21□□□□□ -2.22
HDAC2-215ENST00000523334 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
HDAC2-215ENST00000523334 LCE1AQ5T7P2 110 aa1.21□□□□□ -2.22
HDAC2-215ENST00000523334 KRTAP2-4Q9BYR9 128 aa1.21□□□□□ -2.22
HDAC2-215ENST00000523334 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
HDAC2-215ENST00000523334 SYNE2Q8WXH0 6885 aaKnown RBP1.2□□□□□ -2.22
HDAC2-215ENST00000523334 KRTAP6-3Q3LI67 103 aa1.19□□□□□ -2.22
HDAC2-215ENST00000523334 MT1AP04731 61 aa1.17□□□□□ -2.22
HDAC2-215ENST00000523334 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
HDAC2-215ENST00000523334 KRTAP12-4P60329 112 aa1.15□□□□□ -2.22
HDAC2-215ENST00000523334 OBSCNQ5VST9 7968 aa1.14□□□□□ -2.23
HDAC2-215ENST00000523334 KRTAP6-1Q3LI64 71 aa1.14□□□□□ -2.23
HDAC2-215ENST00000523334 LCE3DQ9BYE3 92 aa1.13□□□□□ -2.23
HDAC2-215ENST00000523334 KRTAP5-5Q701N2 237 aaPredicted RBP1.11□□□□□ -2.23
HDAC2-215ENST00000523334 MT3P25713 68 aa1.1□□□□□ -2.23
HDAC2-215ENST00000523334 LCE3EQ5T5B0 92 aa1.1□□□□□ -2.23
HDAC2-215ENST00000523334 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
HDAC2-215ENST00000523334 KRTAP5-8O75690 187 aa1.09□□□□□ -2.23
HDAC2-215ENST00000523334 MT4P47944 62 aa1.08□□□□□ -2.24
HDAC2-215ENST00000523334 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
HDAC2-215ENST00000523334 NEBP20929 6669 aa1.06□□□□□ -2.24
HDAC2-215ENST00000523334 KRTAP5-1Q6L8H4 278 aa1.05□□□□□ -2.24
HDAC2-215ENST00000523334 KRTAP2-2Q9BYT5 123 aa1.05□□□□□ -2.24
HDAC2-215ENST00000523334 KRTAP20-1Q3LI63 56 aa1.04□□□□□ -2.24
HDAC2-215ENST00000523334 PRM1P04553 51 aa0.99□□□□□ -2.25
HDAC2-215ENST00000523334 KRTAP20-2Q3LI61 65 aa0.98□□□□□ -2.25
HDAC2-215ENST00000523334 LCE1BQ5T7P3 118 aa0.94□□□□□ -2.26
HDAC2-215ENST00000523334 LCE1EQ5T753 118 aa0.87□□□□□ -2.27
HDAC2-215ENST00000523334 MUC5ACP98088 5654 aa0.84□□□□□ -2.27
HDAC2-215ENST00000523334 GPR98Q8WXG9 6306 aa0.84□□□□□ -2.28
HDAC2-215ENST00000523334 LCE1CQ5T751 118 aa0.8□□□□□ -2.28
HDAC2-215ENST00000523334 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
HDAC2-215ENST00000523334 MUC19Q7Z5P9 8384 aa0.78□□□□□ -2.28
HDAC2-215ENST00000523334 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.29
HDAC2-215ENST00000523334 KRTAP5-10Q6L8G5 202 aa0.76□□□□□ -2.29
HDAC2-215ENST00000523334 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
HDAC2-215ENST00000523334 LCE1FQ5T754 118 aa0.72□□□□□ -2.29
HDAC2-215ENST00000523334 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
HDAC2-215ENST00000523334 PHGR1C9JFL3 82 aa0.59□□□□□ -2.32
HDAC2-215ENST00000523334 KRTAP21-1Q3LI58 79 aa0.55□□□□□ -2.32
HDAC2-215ENST00000523334 MUC16Q8WXI7 14507 aa0.37□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms