RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
DENND3-221ENST00000523308 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
DENND3-221ENST00000523308 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
DENND3-221ENST00000523308 LCE3CQ5T5A8 94 aa4.35□□□□□ -1.71
DENND3-221ENST00000523308 LCE1DQ5T752 114 aa4.34□□□□□ -1.71
DENND3-221ENST00000523308 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
DENND3-221ENST00000523308 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
DENND3-221ENST00000523308 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
DENND3-221ENST00000523308 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
DENND3-221ENST00000523308 LCE4AQ5TA78 99 aa4.27□□□□□ -1.73
DENND3-221ENST00000523308 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
DENND3-221ENST00000523308 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
DENND3-221ENST00000523308 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
DENND3-221ENST00000523308 FCGBPQ9Y6R7 5405 aaPredicted RBP4.16□□□□□ -1.74
DENND3-221ENST00000523308 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
DENND3-221ENST00000523308 DSTQ03001 7570 aaKnown RBP4.14□□□□□ -1.75
DENND3-221ENST00000523308 MT1LQ93083 61 aa4.11□□□□□ -1.75
DENND3-221ENST00000523308 MT1EP04732 61 aa4.11□□□□□ -1.75
DENND3-221ENST00000523308 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
DENND3-221ENST00000523308 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
DENND3-221ENST00000523308 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
DENND3-221ENST00000523308 MT1GP13640 62 aa3.97□□□□□ -1.77
DENND3-221ENST00000523308 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.77
DENND3-221ENST00000523308 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
DENND3-221ENST00000523308 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
DENND3-221ENST00000523308 PRM1P04553 51 aa3.87□□□□□ -1.79
DENND3-221ENST00000523308 SYNE2Q8WXH0 6885 aaKnown RBP3.85□□□□□ -1.79
DENND3-221ENST00000523308 MT1MQ8N339 61 aa3.85□□□□□ -1.79
DENND3-221ENST00000523308 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
DENND3-221ENST00000523308 KRTAP19-3Q7Z4W3 81 aa3.82□□□□□ -1.8
DENND3-221ENST00000523308 SPRR2FQ96RM1 72 aa3.8□□□□□ -1.8
DENND3-221ENST00000523308 KRTAP20-1Q3LI63 56 aa3.76□□□□□ -1.81
DENND3-221ENST00000523308 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
DENND3-221ENST00000523308 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
DENND3-221ENST00000523308 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
DENND3-221ENST00000523308 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
DENND3-221ENST00000523308 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
DENND3-221ENST00000523308 KRTAP5-9P26371 169 aa3.65□□□□□ -1.82
DENND3-221ENST00000523308 KRTAP5-5Q701N2 237 aaPredicted RBP3.62□□□□□ -1.83
DENND3-221ENST00000523308 MT3P25713 68 aa3.61□□□□□ -1.83
DENND3-221ENST00000523308 NEBP20929 6669 aa3.58□□□□□ -1.84
DENND3-221ENST00000523308 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
DENND3-221ENST00000523308 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
DENND3-221ENST00000523308 SPRR2EP22531 72 aa3.42□□□□□ -1.86
DENND3-221ENST00000523308 SPRR2BP35325 72 aa3.42□□□□□ -1.86
DENND3-221ENST00000523308 SPRR2AP35326 72 aa3.42□□□□□ -1.86
DENND3-221ENST00000523308 MT1AP04731 61 aa3.4□□□□□ -1.87
DENND3-221ENST00000523308 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
DENND3-221ENST00000523308 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
DENND3-221ENST00000523308 SPRR2DP22532 72 aa3.24□□□□□ -1.89
DENND3-221ENST00000523308 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
DENND3-221ENST00000523308 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
DENND3-221ENST00000523308 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
DENND3-221ENST00000523308 MT4P47944 62 aa2.99□□□□□ -1.93
DENND3-221ENST00000523308 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
DENND3-221ENST00000523308 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
DENND3-221ENST00000523308 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
DENND3-221ENST00000523308 MUC5BQ9HC84 5762 aaPredicted RBP2.93□□□□□ -1.94
DENND3-221ENST00000523308 KRTAP5-4Q6L8H1 288 aa2.9□□□□□ -1.95
DENND3-221ENST00000523308 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
DENND3-221ENST00000523308 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.95
DENND3-221ENST00000523308 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
DENND3-221ENST00000523308 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
DENND3-221ENST00000523308 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
DENND3-221ENST00000523308 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
DENND3-221ENST00000523308 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
DENND3-221ENST00000523308 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
DENND3-221ENST00000523308 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
DENND3-221ENST00000523308 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
DENND3-221ENST00000523308 KRTAP5-8O75690 187 aa2.4□□□□□ -2.02
DENND3-221ENST00000523308 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
DENND3-221ENST00000523308 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
DENND3-221ENST00000523308 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
DENND3-221ENST00000523308 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
DENND3-221ENST00000523308 KRTAP5-11Q6L8G4 156 aa1.96□□□□□ -2.1
DENND3-221ENST00000523308 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
DENND3-221ENST00000523308 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 107.8 ms