RNA–Protein interactions for RNA: ENST00000523203.5

CSNK1A1-208, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-208ENST00000523203 MIR22HGQ0VDD5 57 aa4.06□□□□□ -1.76
CSNK1A1-208ENST00000523203 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
CSNK1A1-208ENST00000523203 KRTAP4-2Q9BYR5 136 aa4.01□□□□□ -1.77
CSNK1A1-208ENST00000523203 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
CSNK1A1-208ENST00000523203 BRK1Q8WUW1 75 aa3.98□□□□□ -1.77
CSNK1A1-208ENST00000523203 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
CSNK1A1-208ENST00000523203 C10orf95Q9H7T3 257 aa3.95□□□□□ -1.78
CSNK1A1-208ENST00000523203 K7ERS5 55 aa3.93□□□□□ -1.78
CSNK1A1-208ENST00000523203 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
CSNK1A1-208ENST00000523203 LCE5AQ5TCM9 118 aa3.87□□□□□ -1.79
CSNK1A1-208ENST00000523203 TNP1P09430 55 aa3.85□□□□□ -1.79
CSNK1A1-208ENST00000523203 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
CSNK1A1-208ENST00000523203 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
CSNK1A1-208ENST00000523203 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
CSNK1A1-208ENST00000523203 MT1EP04732 61 aa3.81□□□□□ -1.8
CSNK1A1-208ENST00000523203 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
CSNK1A1-208ENST00000523203 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
CSNK1A1-208ENST00000523203 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
CSNK1A1-208ENST00000523203 H3BS24 57 aa3.77□□□□□ -1.81
CSNK1A1-208ENST00000523203 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
CSNK1A1-208ENST00000523203 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
CSNK1A1-208ENST00000523203 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
CSNK1A1-208ENST00000523203 MT1GP13640 62 aa3.72□□□□□ -1.81
CSNK1A1-208ENST00000523203 ROMO1P60602 79 aa3.71□□□□□ -1.82
CSNK1A1-208ENST00000523203 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
CSNK1A1-208ENST00000523203 MT4P47944 62 aa3.7□□□□□ -1.82
CSNK1A1-208ENST00000523203 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
CSNK1A1-208ENST00000523203 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
CSNK1A1-208ENST00000523203 MT1MQ8N339 61 aa3.65□□□□□ -1.83
CSNK1A1-208ENST00000523203 KRTAP12-3P60328 96 aa3.63□□□□□ -1.83
CSNK1A1-208ENST00000523203 MT1LQ93083 61 aa3.61□□□□□ -1.83
CSNK1A1-208ENST00000523203 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.83
CSNK1A1-208ENST00000523203 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
CSNK1A1-208ENST00000523203 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
CSNK1A1-208ENST00000523203 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CSNK1A1-208ENST00000523203 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
CSNK1A1-208ENST00000523203 KTN1-AS1Q86SY8 53 aa3.52□□□□□ -1.85
CSNK1A1-208ENST00000523203 SVIPQ8NHG7 77 aa3.52□□□□□ -1.85
CSNK1A1-208ENST00000523203 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
CSNK1A1-208ENST00000523203 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
CSNK1A1-208ENST00000523203 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
CSNK1A1-208ENST00000523203 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
CSNK1A1-208ENST00000523203 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
CSNK1A1-208ENST00000523203 KRTAP12-4P60329 112 aa3.36□□□□□ -1.87
CSNK1A1-208ENST00000523203 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
CSNK1A1-208ENST00000523203 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
CSNK1A1-208ENST00000523203 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
CSNK1A1-208ENST00000523203 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
CSNK1A1-208ENST00000523203 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
CSNK1A1-208ENST00000523203 MT1AP04731 61 aa3.07□□□□□ -1.92
CSNK1A1-208ENST00000523203 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
CSNK1A1-208ENST00000523203 KRTAP5-8O75690 187 aa3.04□□□□□ -1.92
CSNK1A1-208ENST00000523203 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
CSNK1A1-208ENST00000523203 MUC5ACP98088 5654 aa2.99□□□□□ -1.93
CSNK1A1-208ENST00000523203 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
CSNK1A1-208ENST00000523203 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
CSNK1A1-208ENST00000523203 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
CSNK1A1-208ENST00000523203 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
CSNK1A1-208ENST00000523203 MT3P25713 68 aa2.84□□□□□ -1.95
CSNK1A1-208ENST00000523203 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
CSNK1A1-208ENST00000523203 NDUFAF8A1L188 74 aa2.76□□□□□ -1.97
CSNK1A1-208ENST00000523203 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
CSNK1A1-208ENST00000523203 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
CSNK1A1-208ENST00000523203 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
CSNK1A1-208ENST00000523203 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
CSNK1A1-208ENST00000523203 A0A0A0MQY5 61 aa2.46□□□□□ -2.02
CSNK1A1-208ENST00000523203 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
CSNK1A1-208ENST00000523203 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
CSNK1A1-208ENST00000523203 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
CSNK1A1-208ENST00000523203 INE1O15225 51 aa2.34□□□□□ -2.03
CSNK1A1-208ENST00000523203 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
CSNK1A1-208ENST00000523203 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
CSNK1A1-208ENST00000523203 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
CSNK1A1-208ENST00000523203 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
CSNK1A1-208ENST00000523203 PRM1P04553 51 aa1.94□□□□□ -2.1
CSNK1A1-208ENST00000523203 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
CSNK1A1-208ENST00000523203 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
CSNK1A1-208ENST00000523203 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 109.7 ms