RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 LCE4AQ5TA78 99 aa4.3□□□□□ -1.72
VEGFA-223ENST00000523125 PRR15LQ9BU68 103 aa4.3□□□□□ -1.72
VEGFA-223ENST00000523125 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
VEGFA-223ENST00000523125 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
VEGFA-223ENST00000523125 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
VEGFA-223ENST00000523125 MT4P47944 62 aa4.26□□□□□ -1.73
VEGFA-223ENST00000523125 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
VEGFA-223ENST00000523125 RPS28P62857 69 aaKnown RBP4.22□□□□□ -1.73
VEGFA-223ENST00000523125 KRTAP12-3P60328 96 aa4.21□□□□□ -1.74
VEGFA-223ENST00000523125 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
VEGFA-223ENST00000523125 UQCR11O14957 56 aa4.18□□□□□ -1.74
VEGFA-223ENST00000523125 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
VEGFA-223ENST00000523125 V9GYY9 64 aa4.16□□□□□ -1.74
VEGFA-223ENST00000523125 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
VEGFA-223ENST00000523125 Q1T7F1 81 aa4.1□□□□□ -1.75
VEGFA-223ENST00000523125 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
VEGFA-223ENST00000523125 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
VEGFA-223ENST00000523125 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
VEGFA-223ENST00000523125 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
VEGFA-223ENST00000523125 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
VEGFA-223ENST00000523125 PSPHP1O15172 72 aa4□□□□□ -1.77
VEGFA-223ENST00000523125 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
VEGFA-223ENST00000523125 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
VEGFA-223ENST00000523125 K7ERS5 55 aa3.98□□□□□ -1.77
VEGFA-223ENST00000523125 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
VEGFA-223ENST00000523125 KRTAP19-4Q3LI73 84 aa3.96□□□□□ -1.78
VEGFA-223ENST00000523125 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
VEGFA-223ENST00000523125 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
VEGFA-223ENST00000523125 H3BS24 57 aa3.92□□□□□ -1.78
VEGFA-223ENST00000523125 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
VEGFA-223ENST00000523125 KRTAP15-1Q3LI76 137 aa3.91□□□□□ -1.78
VEGFA-223ENST00000523125 A6NED7 52 aa3.9□□□□□ -1.79
VEGFA-223ENST00000523125 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.79
VEGFA-223ENST00000523125 PMAIP1Q13794 54 aa3.89□□□□□ -1.79
VEGFA-223ENST00000523125 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
VEGFA-223ENST00000523125 LCE3CQ5T5A8 94 aa3.88□□□□□ -1.79
VEGFA-223ENST00000523125 BRK1Q8WUW1 75 aa3.85□□□□□ -1.79
VEGFA-223ENST00000523125 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
VEGFA-223ENST00000523125 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
VEGFA-223ENST00000523125 MT1AP04731 61 aa3.74□□□□□ -1.81
VEGFA-223ENST00000523125 ROMO1P60602 79 aa3.74□□□□□ -1.81
VEGFA-223ENST00000523125 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
VEGFA-223ENST00000523125 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
VEGFA-223ENST00000523125 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
VEGFA-223ENST00000523125 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
VEGFA-223ENST00000523125 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
VEGFA-223ENST00000523125 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
VEGFA-223ENST00000523125 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
VEGFA-223ENST00000523125 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
VEGFA-223ENST00000523125 OBSCNQ5VST9 7968 aa3.49□□□□□ -1.85
VEGFA-223ENST00000523125 MT3P25713 68 aa3.41□□□□□ -1.86
VEGFA-223ENST00000523125 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
VEGFA-223ENST00000523125 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
VEGFA-223ENST00000523125 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
VEGFA-223ENST00000523125 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
VEGFA-223ENST00000523125 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
VEGFA-223ENST00000523125 PRAC1Q96KF2 57 aa3.33□□□□□ -1.88
VEGFA-223ENST00000523125 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
VEGFA-223ENST00000523125 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
VEGFA-223ENST00000523125 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
VEGFA-223ENST00000523125 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
VEGFA-223ENST00000523125 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
VEGFA-223ENST00000523125 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
VEGFA-223ENST00000523125 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
VEGFA-223ENST00000523125 KRTAP4-12Q9BQ66 201 aa2.74□□□□□ -1.97
VEGFA-223ENST00000523125 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.67□□□□□ -1.98
VEGFA-223ENST00000523125 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
VEGFA-223ENST00000523125 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
VEGFA-223ENST00000523125 LCE1FQ5T754 118 aa2.59□□□□□ -1.99
VEGFA-223ENST00000523125 INE1O15225 51 aa2.53□□□□□ -2
VEGFA-223ENST00000523125 KRTAP21-2Q3LI59 83 aa2.48□□□□□ -2.01
VEGFA-223ENST00000523125 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
VEGFA-223ENST00000523125 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
VEGFA-223ENST00000523125 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
VEGFA-223ENST00000523125 PRM1P04553 51 aa1.91□□□□□ -2.1
VEGFA-223ENST00000523125 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
VEGFA-223ENST00000523125 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms