RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.83
RAB11FIP1-204ENST00000522774 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
RAB11FIP1-204ENST00000522774 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.84
RAB11FIP1-204ENST00000522774 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.84
RAB11FIP1-204ENST00000522774 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.84
RAB11FIP1-204ENST00000522774 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
RAB11FIP1-204ENST00000522774 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
RAB11FIP1-204ENST00000522774 MT1MQ8N339 61 aa3.54□□□□□ -1.84
RAB11FIP1-204ENST00000522774 MT1GP13640 62 aa3.52□□□□□ -1.85
RAB11FIP1-204ENST00000522774 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
RAB11FIP1-204ENST00000522774 SPRR2FQ96RM1 72 aa3.47□□□□□ -1.85
RAB11FIP1-204ENST00000522774 LCE5AQ5TCM9 118 aa3.44□□□□□ -1.86
RAB11FIP1-204ENST00000522774 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
RAB11FIP1-204ENST00000522774 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
RAB11FIP1-204ENST00000522774 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
RAB11FIP1-204ENST00000522774 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
RAB11FIP1-204ENST00000522774 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
RAB11FIP1-204ENST00000522774 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
RAB11FIP1-204ENST00000522774 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
RAB11FIP1-204ENST00000522774 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
RAB11FIP1-204ENST00000522774 LCE3BQ5TA77 95 aa3.22□□□□□ -1.89
RAB11FIP1-204ENST00000522774 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
RAB11FIP1-204ENST00000522774 SPRR2EP22531 72 aa3.18□□□□□ -1.9
RAB11FIP1-204ENST00000522774 SPRR2BP35325 72 aa3.18□□□□□ -1.9
RAB11FIP1-204ENST00000522774 SPRR2AP35326 72 aa3.18□□□□□ -1.9
RAB11FIP1-204ENST00000522774 MT1AP04731 61 aa3.16□□□□□ -1.9
RAB11FIP1-204ENST00000522774 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
RAB11FIP1-204ENST00000522774 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
RAB11FIP1-204ENST00000522774 KRTAP12-4P60329 112 aa3.15□□□□□ -1.91
RAB11FIP1-204ENST00000522774 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
RAB11FIP1-204ENST00000522774 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
RAB11FIP1-204ENST00000522774 SPRR2DP22532 72 aa3.05□□□□□ -1.92
RAB11FIP1-204ENST00000522774 KRTAP9-6A0A140TA67 174 aa3.04□□□□□ -1.92
RAB11FIP1-204ENST00000522774 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.03□□□□□ -1.92
RAB11FIP1-204ENST00000522774 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
RAB11FIP1-204ENST00000522774 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
RAB11FIP1-204ENST00000522774 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
RAB11FIP1-204ENST00000522774 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
RAB11FIP1-204ENST00000522774 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
RAB11FIP1-204ENST00000522774 LCE1EQ5T753 118 aa2.96□□□□□ -1.93
RAB11FIP1-204ENST00000522774 KRTAP9-7A8MTY7 169 aa2.94□□□□□ -1.94
RAB11FIP1-204ENST00000522774 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
RAB11FIP1-204ENST00000522774 KRTAP6-2Q3LI66 62 aa2.88□□□□□ -1.95
RAB11FIP1-204ENST00000522774 OBSCNQ5VST9 7968 aa2.84□□□□□ -1.95
RAB11FIP1-204ENST00000522774 LCE1DQ5T752 114 aa2.84□□□□□ -1.96
RAB11FIP1-204ENST00000522774 NEBP20929 6669 aa2.83□□□□□ -1.96
RAB11FIP1-204ENST00000522774 MT3P25713 68 aa2.83□□□□□ -1.96
RAB11FIP1-204ENST00000522774 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
RAB11FIP1-204ENST00000522774 PRM1P04553 51 aa2.78□□□□□ -1.96
RAB11FIP1-204ENST00000522774 KRTAP4-6Q9BYQ5 205 aa2.72□□□□□ -1.97
RAB11FIP1-204ENST00000522774 MT4P47944 62 aa2.7□□□□□ -1.98
RAB11FIP1-204ENST00000522774 KRTAP20-2Q3LI61 65 aa2.64□□□□□ -1.99
RAB11FIP1-204ENST00000522774 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
RAB11FIP1-204ENST00000522774 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
RAB11FIP1-204ENST00000522774 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
RAB11FIP1-204ENST00000522774 KRTAP20-1Q3LI63 56 aa2.5□□□□□ -2.01
RAB11FIP1-204ENST00000522774 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
RAB11FIP1-204ENST00000522774 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
RAB11FIP1-204ENST00000522774 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
RAB11FIP1-204ENST00000522774 KRTAP4-12Q9BQ66 201 aa2.24□□□□□ -2.05
RAB11FIP1-204ENST00000522774 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
RAB11FIP1-204ENST00000522774 KRTAP5-10Q6L8G5 202 aa2.23□□□□□ -2.05
RAB11FIP1-204ENST00000522774 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
RAB11FIP1-204ENST00000522774 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
RAB11FIP1-204ENST00000522774 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
RAB11FIP1-204ENST00000522774 AHNAK2Q8IVF2 5795 aa2.12□□□□□ -2.07
RAB11FIP1-204ENST00000522774 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
RAB11FIP1-204ENST00000522774 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
RAB11FIP1-204ENST00000522774 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
RAB11FIP1-204ENST00000522774 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
RAB11FIP1-204ENST00000522774 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
RAB11FIP1-204ENST00000522774 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
RAB11FIP1-204ENST00000522774 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
RAB11FIP1-204ENST00000522774 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.1
RAB11FIP1-204ENST00000522774 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
RAB11FIP1-204ENST00000522774 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
RAB11FIP1-204ENST00000522774 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
RAB11FIP1-204ENST00000522774 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 148.6 ms