RNA–Protein interactions for RNA: ENST00000521986.5

PTK2-238, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 2,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-238	ENST00000521986	KRTAP2-1	Q9BYU5	128 aa		2.98	□□□□□ -1.93
PTK2-238	ENST00000521986	CRCT1	Q9UGL9	99 aa		2.92	□□□□□ -1.94
PTK2-238	ENST00000521986	MT1L	Q93083	61 aa		2.9	□□□□□ -1.95
PTK2-238	ENST00000521986	MT1E	P04732	61 aa		2.89	□□□□□ -1.95
PTK2-238	ENST00000521986	MACF1	Q9UPN3	7388 aa	Known RBP	2.87	□□□□□ -1.95
PTK2-238	ENST00000521986	KRTAP19-4	Q3LI73	84 aa		2.85	□□□□□ -1.95
PTK2-238	ENST00000521986	SYNE2	Q8WXH0	6885 aa	Known RBP	2.83	□□□□□ -1.96
PTK2-238	ENST00000521986	MUC12	Q9UKN1	5478 aa		2.81	□□□□□ -1.96
PTK2-238	ENST00000521986	KRTAP4-3	Q9BYR4	195 aa		2.79	□□□□□ -1.96
PTK2-238	ENST00000521986	LOC100996750	A0A140TA64	210 aa		2.78	□□□□□ -1.96
PTK2-238	ENST00000521986	KRTAP9-6	A0A140TA67	174 aa		2.76	□□□□□ -1.97
PTK2-238	ENST00000521986	SPRR2F	Q96RM1	72 aa		2.74	□□□□□ -1.97
PTK2-238	ENST00000521986	MT1G	P13640	62 aa		2.73	□□□□□ -1.97
PTK2-238	ENST00000521986	KRTAP2-2	Q9BYT5	123 aa		2.71	□□□□□ -1.98
PTK2-238	ENST00000521986	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	2.7	□□□□□ -1.98
PTK2-238	ENST00000521986	KRTAP12-4	P60329	112 aa		2.7	□□□□□ -1.98
PTK2-238	ENST00000521986	MT1M	Q8N339	61 aa		2.7	□□□□□ -1.98
PTK2-238	ENST00000521986	MDN1	Q9NU22	5596 aa		2.69	□□□□□ -1.98
PTK2-238	ENST00000521986	KRTAP19-3	Q7Z4W3	81 aa		2.68	□□□□□ -1.98
PTK2-238	ENST00000521986	KRTAP5-9	P26371	169 aa		2.65	□□□□□ -1.99
PTK2-238	ENST00000521986	LCE5A	Q5TCM9	118 aa		2.64	□□□□□ -1.99
PTK2-238	ENST00000521986	DST	Q03001	7570 aa	Known RBP	2.63	□□□□□ -1.99
PTK2-238	ENST00000521986	LCE1A	Q5T7P2	110 aa		2.6	□□□□□ -1.99
PTK2-238	ENST00000521986	KRTAP6-3	Q3LI67	103 aa		2.59	□□□□□ -1.99
PTK2-238	ENST00000521986	SPRR2E	P22531	72 aa		2.58	□□□□□ -2
PTK2-238	ENST00000521986	SPRR2B	P35325	72 aa		2.58	□□□□□ -2
PTK2-238	ENST00000521986	SPRR2A	P35326	72 aa		2.58	□□□□□ -2
PTK2-238	ENST00000521986	LCE3B	Q5TA77	95 aa		2.55	□□□□□ -2
PTK2-238	ENST00000521986	KRTAP9-7	A8MTY7	169 aa		2.54	□□□□□ -2
PTK2-238	ENST00000521986	KRTAP4-9	Q9BYQ8	210 aa		2.54	□□□□□ -2
PTK2-238	ENST00000521986	SYNE1	Q8NF91	8797 aa	Known RBP	2.53	□□□□□ -2
PTK2-238	ENST00000521986	LCE1F	Q5T754	118 aa		2.5	□□□□□ -2.01
PTK2-238	ENST00000521986	MT1A	P04731	61 aa		2.48	□□□□□ -2.01
PTK2-238	ENST00000521986	SPRR2D	P22532	72 aa		2.48	□□□□□ -2.01
PTK2-238	ENST00000521986	KRTAP6-1	Q3LI64	71 aa		2.47	□□□□□ -2.01
PTK2-238	ENST00000521986	NEB	P20929	6669 aa		2.46	□□□□□ -2.02
PTK2-238	ENST00000521986	LCE3D	Q9BYE3	92 aa		2.45	□□□□□ -2.02
PTK2-238	ENST00000521986	KRTAP9-4	Q9BYQ2	154 aa		2.44	□□□□□ -2.02
PTK2-238	ENST00000521986	LCE1E	Q5T753	118 aa		2.43	□□□□□ -2.02
PTK2-238	ENST00000521986	LCE3E	Q5T5B0	92 aa		2.42	□□□□□ -2.02
PTK2-238	ENST00000521986	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.41	□□□□□ -2.02
PTK2-238	ENST00000521986	PRM1	P04553	51 aa		2.41	□□□□□ -2.02
PTK2-238	ENST00000521986	LCE1D	Q5T752	114 aa		2.33	□□□□□ -2.04
PTK2-238	ENST00000521986	KRTAP9-9	Q9BYP9	154 aa		2.31	□□□□□ -2.04
PTK2-238	ENST00000521986	OBSCN	Q5VST9	7968 aa		2.3	□□□□□ -2.04
PTK2-238	ENST00000521986	LCE4A	Q5TA78	99 aa		2.29	□□□□□ -2.04
PTK2-238	ENST00000521986	KRTAP6-2	Q3LI66	62 aa		2.28	□□□□□ -2.04
PTK2-238	ENST00000521986	KRTAP20-1	Q3LI63	56 aa		2.23	□□□□□ -2.05
PTK2-238	ENST00000521986	MT4	P47944	62 aa		2.21	□□□□□ -2.06
PTK2-238	ENST00000521986	KRTAP5-4	Q6L8H1	288 aa		2.21	□□□□□ -2.06
PTK2-238	ENST00000521986	KRTAP4-6	Q9BYQ5	205 aa		2.2	□□□□□ -2.06
PTK2-238	ENST00000521986	MT3	P25713	68 aa		2.15	□□□□□ -2.07
PTK2-238	ENST00000521986	HMCN1	Q96RW7	5635 aa		2.13	□□□□□ -2.07
PTK2-238	ENST00000521986	KRTAP20-2	Q3LI61	65 aa		2.09	□□□□□ -2.07
PTK2-238	ENST00000521986	KRTAP5-3	Q6L8H2	238 aa		2.01	□□□□□ -2.09
PTK2-238	ENST00000521986	KRTAP5-2	Q701N4	177 aa		2	□□□□□ -2.09
PTK2-238	ENST00000521986	MUC5AC	P98088	5654 aa		1.88	□□□□□ -2.11
PTK2-238	ENST00000521986	KRTAP4-12	Q9BQ66	201 aa		1.87	□□□□□ -2.11
PTK2-238	ENST00000521986	AHNAK2	Q8IVF2	5795 aa		1.83	□□□□□ -2.12
PTK2-238	ENST00000521986	KRTAP4-11	Q9BYQ6	195 aa		1.82	□□□□□ -2.12
PTK2-238	ENST00000521986	GPR98	Q8WXG9	6306 aa		1.77	□□□□□ -2.13
PTK2-238	ENST00000521986	LCE1B	Q5T7P3	118 aa		1.77	□□□□□ -2.13
PTK2-238	ENST00000521986	KRTAP5-1	Q6L8H4	278 aa		1.77	□□□□□ -2.13
PTK2-238	ENST00000521986	KRTAP5-10	Q6L8G5	202 aa		1.76	□□□□□ -2.13
PTK2-238	ENST00000521986	KRTAP5-8	O75690	187 aa		1.76	□□□□□ -2.13
PTK2-238	ENST00000521986	KRTAP4-2	Q9BYR5	136 aa		1.7	□□□□□ -2.14
PTK2-238	ENST00000521986	MUC19	Q7Z5P9	8384 aa		1.69	□□□□□ -2.14
PTK2-238	ENST00000521986	LCE1C	Q5T751	118 aa		1.66	□□□□□ -2.14
PTK2-238	ENST00000521986	KRTAP5-7	Q6L8G8	165 aa		1.63	□□□□□ -2.15
PTK2-238	ENST00000521986	KRTAP21-2	Q3LI59	83 aa		1.59	□□□□□ -2.16
PTK2-238	ENST00000521986	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.59	□□□□□ -2.16
PTK2-238	ENST00000521986	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	1.55	□□□□□ -2.16
PTK2-238	ENST00000521986	KRTAP21-1	Q3LI58	79 aa		1.51	□□□□□ -2.17
PTK2-238	ENST00000521986	KRTAP4-4	Q9BYR3	166 aa		1.5	□□□□□ -2.17
PTK2-238	ENST00000521986	KRTAP5-11	Q6L8G4	156 aa		1.45	□□□□□ -2.18
PTK2-238	ENST00000521986	AHNAK	Q09666	5890 aa	Known RBP	1.43	□□□□□ -2.18
PTK2-238	ENST00000521986	PHGR1	C9JFL3	82 aa		1.27	□□□□□ -2.21
PTK2-238	ENST00000521986	MUC16	Q8WXI7	14507 aa		0.83	□□□□□ -2.28

Retrieved 78 of 20,778 RNA–protein pairs in 43.3 ms