RNA–Protein interactions for RNA: ENST00000521672.5

NPM1-208, Transcript of nucleophosmin 1, humanhuman

TSL 5

Gene NPM1, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-208ENST00000521672 C10orf95Q9H7T3 257 aa3.18□□□□□ -1.9
NPM1-208ENST00000521672 NEBP20929 6669 aa3.18□□□□□ -1.9
NPM1-208ENST00000521672 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
NPM1-208ENST00000521672 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
NPM1-208ENST00000521672 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
NPM1-208ENST00000521672 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
NPM1-208ENST00000521672 SPRR2EP22531 72 aa3.1□□□□□ -1.91
NPM1-208ENST00000521672 SPRR2BP35325 72 aa3.1□□□□□ -1.91
NPM1-208ENST00000521672 SPRR2AP35326 72 aa3.1□□□□□ -1.91
NPM1-208ENST00000521672 ROMO1P60602 79 aa3.08□□□□□ -1.92
NPM1-208ENST00000521672 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
NPM1-208ENST00000521672 KRTAP19-7Q3SYF9 63 aa3.04□□□□□ -1.92
NPM1-208ENST00000521672 BRK1Q8WUW1 75 aa3.04□□□□□ -1.92
NPM1-208ENST00000521672 MT1EP04732 61 aa3.03□□□□□ -1.92
NPM1-208ENST00000521672 KRTAP19-5Q3LI72 72 aa3.03□□□□□ -1.92
NPM1-208ENST00000521672 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
NPM1-208ENST00000521672 SPRR2DP22532 72 aa3.01□□□□□ -1.93
NPM1-208ENST00000521672 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
NPM1-208ENST00000521672 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
NPM1-208ENST00000521672 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
NPM1-208ENST00000521672 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
NPM1-208ENST00000521672 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
NPM1-208ENST00000521672 MT1GP13640 62 aa2.98□□□□□ -1.93
NPM1-208ENST00000521672 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
NPM1-208ENST00000521672 MT1LQ93083 61 aa2.92□□□□□ -1.94
NPM1-208ENST00000521672 PMAIP1Q13794 54 aa2.9□□□□□ -1.95
NPM1-208ENST00000521672 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
NPM1-208ENST00000521672 MT1MQ8N339 61 aa2.86□□□□□ -1.95
NPM1-208ENST00000521672 PRO0628Q9UI54 55 aa2.86□□□□□ -1.95
NPM1-208ENST00000521672 DSTQ03001 7570 aaKnown RBP2.85□□□□□ -1.95
NPM1-208ENST00000521672 MT3P25713 68 aa2.8□□□□□ -1.96
NPM1-208ENST00000521672 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
NPM1-208ENST00000521672 LCE3CQ5T5A8 94 aa2.77□□□□□ -1.97
NPM1-208ENST00000521672 A0A0A0MQY5 61 aa2.76□□□□□ -1.97
NPM1-208ENST00000521672 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
NPM1-208ENST00000521672 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
NPM1-208ENST00000521672 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
NPM1-208ENST00000521672 SVIPQ8NHG7 77 aa2.69□□□□□ -1.98
NPM1-208ENST00000521672 KTN1-AS1Q86SY8 53 aa2.67□□□□□ -1.98
NPM1-208ENST00000521672 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
NPM1-208ENST00000521672 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
NPM1-208ENST00000521672 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
NPM1-208ENST00000521672 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
NPM1-208ENST00000521672 KRTAP12-4P60329 112 aa2.59□□□□□ -1.99
NPM1-208ENST00000521672 MT4P47944 62 aa2.57□□□□□ -2
NPM1-208ENST00000521672 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
NPM1-208ENST00000521672 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
NPM1-208ENST00000521672 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
NPM1-208ENST00000521672 MT1AP04731 61 aa2.51□□□□□ -2.01
NPM1-208ENST00000521672 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
NPM1-208ENST00000521672 KRTAP20-2Q3LI61 65 aa2.47□□□□□ -2.01
NPM1-208ENST00000521672 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
NPM1-208ENST00000521672 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
NPM1-208ENST00000521672 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
NPM1-208ENST00000521672 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
NPM1-208ENST00000521672 LUZP6Q538Z0 58 aa2.37□□□□□ -2.03
NPM1-208ENST00000521672 NDUFAF8A1L188 74 aa2.34□□□□□ -2.03
NPM1-208ENST00000521672 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
NPM1-208ENST00000521672 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
NPM1-208ENST00000521672 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
NPM1-208ENST00000521672 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
NPM1-208ENST00000521672 KRTAP5-7Q6L8G8 165 aa2.21□□□□□ -2.06
NPM1-208ENST00000521672 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
NPM1-208ENST00000521672 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
NPM1-208ENST00000521672 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
NPM1-208ENST00000521672 LCE3DQ9BYE3 92 aa2.06□□□□□ -2.08
NPM1-208ENST00000521672 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
NPM1-208ENST00000521672 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
NPM1-208ENST00000521672 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
NPM1-208ENST00000521672 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
NPM1-208ENST00000521672 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
NPM1-208ENST00000521672 INE1O15225 51 aa1.73□□□□□ -2.13
NPM1-208ENST00000521672 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
NPM1-208ENST00000521672 PRM1P04553 51 aa1.54□□□□□ -2.16
NPM1-208ENST00000521672 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
NPM1-208ENST00000521672 MUC19Q7Z5P9 8384 aa1.42□□□□□ -2.18
NPM1-208ENST00000521672 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
NPM1-208ENST00000521672 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 63.2 ms