RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 FASNP49327 2511 aaKnown RBP0.88□□□□□ -2.27
SKP1-208ENST00000521216 CEP295Q9C0D2 2601 aa0.87□□□□□ -2.27
SKP1-208ENST00000521216 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
SKP1-208ENST00000521216 MYO18BQ8IUG5 2567 aa0.86□□□□□ -2.27
SKP1-208ENST00000521216 PRM1P04553 51 aa0.86□□□□□ -2.27
SKP1-208ENST00000521216 MT1AP04731 61 aa0.86□□□□□ -2.27
SKP1-208ENST00000521216 FLNAP21333 2647 aaKnown RBP0.85□□□□□ -2.27
SKP1-208ENST00000521216 ACACBO00763 2458 aa0.84□□□□□ -2.28
SKP1-208ENST00000521216 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
SKP1-208ENST00000521216 FAT1Q14517 4588 aa0.82□□□□□ -2.28
SKP1-208ENST00000521216 HERC1Q15751 4861 aa0.82□□□□□ -2.28
SKP1-208ENST00000521216 IGSF10Q6WRI0 2623 aa0.81□□□□□ -2.28
SKP1-208ENST00000521216 MUC17Q685J3 4493 aa0.81□□□□□ -2.28
SKP1-208ENST00000521216 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
SKP1-208ENST00000521216 MT1EP04732 61 aa0.8□□□□□ -2.28
SKP1-208ENST00000521216 LRP1BQ9NZR2 4599 aa0.8□□□□□ -2.28
SKP1-208ENST00000521216 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
SKP1-208ENST00000521216 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
SKP1-208ENST00000521216 MAST4O15021 2626 aa0.77□□□□□ -2.29
SKP1-208ENST00000521216 FLNBO75369 2602 aaKnown RBP0.77□□□□□ -2.29
SKP1-208ENST00000521216 SPRR2BP35325 72 aa0.77□□□□□ -2.29
SKP1-208ENST00000521216 SPRR2AP35326 72 aa0.77□□□□□ -2.29
SKP1-208ENST00000521216 SPRR2DP22532 72 aa0.76□□□□□ -2.29
SKP1-208ENST00000521216 KRTAP19-2Q3LHN2 52 aa0.76□□□□□ -2.29
SKP1-208ENST00000521216 MT1LQ93083 61 aa0.76□□□□□ -2.29
SKP1-208ENST00000521216 MT1XP80297 61 aa0.75□□□□□ -2.29
SKP1-208ENST00000521216 SPRR2FQ96RM1 72 aa0.74□□□□□ -2.29
SKP1-208ENST00000521216 LRP2P98164 4655 aa0.73□□□□□ -2.29
SKP1-208ENST00000521216 KRTAP6-2Q3LI66 62 aa0.73□□□□□ -2.29
SKP1-208ENST00000521216 SPRR2EP22531 72 aa0.71□□□□□ -2.3
SKP1-208ENST00000521216 MT1HP80294 61 aa0.71□□□□□ -2.3
SKP1-208ENST00000521216 HMCN2Q8NDA2 5059 aa0.71□□□□□ -2.3
SKP1-208ENST00000521216 MUC2Q02817 5179 aa0.7□□□□□ -2.3
SKP1-208ENST00000521216 DNHD1Q96M86 4753 aa0.69□□□□□ -2.3
SKP1-208ENST00000521216 MT1BP07438 61 aa0.68□□□□□ -2.3
SKP1-208ENST00000521216 MT1HL1P0DM35 61 aa0.67□□□□□ -2.3
SKP1-208ENST00000521216 KRTAP19-7Q3SYF9 63 aa0.67□□□□□ -2.3
SKP1-208ENST00000521216 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
SKP1-208ENST00000521216 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
SKP1-208ENST00000521216 RYR3Q15413 4870 aa0.63□□□□□ -2.31
SKP1-208ENST00000521216 HYDINQ4G0P3 5121 aa0.63□□□□□ -2.31
SKP1-208ENST00000521216 MT2AP02795 61 aa0.61□□□□□ -2.31
SKP1-208ENST00000521216 MT1GP13640 62 aa0.6□□□□□ -2.31
SKP1-208ENST00000521216 MT1MQ8N339 61 aa0.6□□□□□ -2.31
SKP1-208ENST00000521216 MT1FP04733 61 aa0.59□□□□□ -2.31
SKP1-208ENST00000521216 HERC2O95714 4834 aa0.58□□□□□ -2.32
SKP1-208ENST00000521216 USH2AO75445 5202 aa0.56□□□□□ -2.32
SKP1-208ENST00000521216 KMT2CQ8NEZ4 4911 aaKnown RBP0.56□□□□□ -2.32
SKP1-208ENST00000521216 UBR4Q5T4S7 5183 aa0.56□□□□□ -2.32
SKP1-208ENST00000521216 PCLOQ9Y6V0 5065 aa0.56□□□□□ -2.32
SKP1-208ENST00000521216 KRTAP6-1Q3LI64 71 aa0.55□□□□□ -2.32
SKP1-208ENST00000521216 BIRC6Q9NR09 4857 aa0.54□□□□□ -2.32
SKP1-208ENST00000521216 RYR1P21817 5038 aa0.54□□□□□ -2.32
SKP1-208ENST00000521216 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
SKP1-208ENST00000521216 SSPOA2VEC9 5147 aa0.52□□□□□ -2.33
SKP1-208ENST00000521216 FAT4Q6V0I7 4981 aa0.52□□□□□ -2.33
SKP1-208ENST00000521216 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
SKP1-208ENST00000521216 RNF213Q63HN8 5207 aa0.51□□□□□ -2.33
SKP1-208ENST00000521216 RYR2Q92736 4967 aa0.51□□□□□ -2.33
SKP1-208ENST00000521216 MDN1Q9NU22 5596 aa0.51□□□□□ -2.33
SKP1-208ENST00000521216 EPPK1P58107 5090 aaKnown RBP0.46□□□□□ -2.34
SKP1-208ENST00000521216 ABCA13Q86UQ4 5058 aa0.46□□□□□ -2.34
SKP1-208ENST00000521216 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
SKP1-208ENST00000521216 MUC5BQ9HC84 5762 aaPredicted RBP0.44□□□□□ -2.34
SKP1-208ENST00000521216 KIAA1109Q2LD37 5005 aa0.42□□□□□ -2.34
SKP1-208ENST00000521216 KMT2DO14686 5537 aa0.4□□□□□ -2.34
SKP1-208ENST00000521216 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
SKP1-208ENST00000521216 MUC12Q9UKN1 5478 aa0.3□□□□□ -2.36
SKP1-208ENST00000521216 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
SKP1-208ENST00000521216 GPR98Q8WXG9 6306 aa0.25□□□□□ -2.37
SKP1-208ENST00000521216 KRTAP20-2Q3LI61 65 aa0.23□□□□□ -2.37
SKP1-208ENST00000521216 MT4P47944 62 aa0.22□□□□□ -2.37
SKP1-208ENST00000521216 KRTAP20-1Q3LI63 56 aa0.17□□□□□ -2.38
SKP1-208ENST00000521216 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
SKP1-208ENST00000521216 FSIP2Q5CZC0 6907 aa0.13□□□□□ -2.39
SKP1-208ENST00000521216 NEBP20929 6669 aa0.09□□□□□ -2.4
SKP1-208ENST00000521216 MACF1Q9UPN3 7388 aaKnown RBP0.04□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 118.5 ms