RNA–Protein interactions for RNA: ENST00000520747.1

FCHSD1-205, Transcript of FCH and double SH3 domains 1, humanhuman

TSL 2

Gene FCHSD1, Length 3,181 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHSD1-205ENST00000520747 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
FCHSD1-205ENST00000520747 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
FCHSD1-205ENST00000520747 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
FCHSD1-205ENST00000520747 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
FCHSD1-205ENST00000520747 KRTAP12-4P60329 112 aa4.22□□□□□ -1.73
FCHSD1-205ENST00000520747 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
FCHSD1-205ENST00000520747 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
FCHSD1-205ENST00000520747 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
FCHSD1-205ENST00000520747 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.76
FCHSD1-205ENST00000520747 DSTQ03001 7570 aaKnown RBP4.06□□□□□ -1.76
FCHSD1-205ENST00000520747 MT1EP04732 61 aa4.05□□□□□ -1.76
FCHSD1-205ENST00000520747 MT1LQ93083 61 aa4.05□□□□□ -1.76
FCHSD1-205ENST00000520747 MT1GP13640 62 aa4□□□□□ -1.77
FCHSD1-205ENST00000520747 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
FCHSD1-205ENST00000520747 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
FCHSD1-205ENST00000520747 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.97□□□□□ -1.77
FCHSD1-205ENST00000520747 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
FCHSD1-205ENST00000520747 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
FCHSD1-205ENST00000520747 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
FCHSD1-205ENST00000520747 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
FCHSD1-205ENST00000520747 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
FCHSD1-205ENST00000520747 MT1MQ8N339 61 aa3.81□□□□□ -1.8
FCHSD1-205ENST00000520747 OBSCNQ5VST9 7968 aa3.81□□□□□ -1.8
FCHSD1-205ENST00000520747 PRM1P04553 51 aa3.79□□□□□ -1.8
FCHSD1-205ENST00000520747 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
FCHSD1-205ENST00000520747 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
FCHSD1-205ENST00000520747 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
FCHSD1-205ENST00000520747 SPRR2EP22531 72 aa3.75□□□□□ -1.81
FCHSD1-205ENST00000520747 SPRR2BP35325 72 aa3.75□□□□□ -1.81
FCHSD1-205ENST00000520747 SPRR2AP35326 72 aa3.75□□□□□ -1.81
FCHSD1-205ENST00000520747 LCE1AQ5T7P2 110 aa3.74□□□□□ -1.81
FCHSD1-205ENST00000520747 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
FCHSD1-205ENST00000520747 NEBP20929 6669 aa3.7□□□□□ -1.82
FCHSD1-205ENST00000520747 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
FCHSD1-205ENST00000520747 LCE3EQ5T5B0 92 aa3.66□□□□□ -1.82
FCHSD1-205ENST00000520747 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
FCHSD1-205ENST00000520747 SPRR2DP22532 72 aa3.59□□□□□ -1.84
FCHSD1-205ENST00000520747 MT1AP04731 61 aa3.54□□□□□ -1.84
FCHSD1-205ENST00000520747 KRTAP6-1Q3LI64 71 aa3.51□□□□□ -1.85
FCHSD1-205ENST00000520747 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
FCHSD1-205ENST00000520747 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
FCHSD1-205ENST00000520747 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
FCHSD1-205ENST00000520747 LCE1EQ5T753 118 aa3.35□□□□□ -1.87
FCHSD1-205ENST00000520747 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
FCHSD1-205ENST00000520747 MT4P47944 62 aa3.25□□□□□ -1.89
FCHSD1-205ENST00000520747 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
FCHSD1-205ENST00000520747 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
FCHSD1-205ENST00000520747 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
FCHSD1-205ENST00000520747 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
FCHSD1-205ENST00000520747 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
FCHSD1-205ENST00000520747 MT3P25713 68 aa3.03□□□□□ -1.92
FCHSD1-205ENST00000520747 LCE4AQ5TA78 99 aa3.02□□□□□ -1.93
FCHSD1-205ENST00000520747 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
FCHSD1-205ENST00000520747 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
FCHSD1-205ENST00000520747 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
FCHSD1-205ENST00000520747 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
FCHSD1-205ENST00000520747 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
FCHSD1-205ENST00000520747 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
FCHSD1-205ENST00000520747 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
FCHSD1-205ENST00000520747 LCE1FQ5T754 118 aa2.68□□□□□ -1.98
FCHSD1-205ENST00000520747 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
FCHSD1-205ENST00000520747 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
FCHSD1-205ENST00000520747 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
FCHSD1-205ENST00000520747 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
FCHSD1-205ENST00000520747 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
FCHSD1-205ENST00000520747 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
FCHSD1-205ENST00000520747 KRTAP5-8O75690 187 aa2.53□□□□□ -2
FCHSD1-205ENST00000520747 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
FCHSD1-205ENST00000520747 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
FCHSD1-205ENST00000520747 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
FCHSD1-205ENST00000520747 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
FCHSD1-205ENST00000520747 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
FCHSD1-205ENST00000520747 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
FCHSD1-205ENST00000520747 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
FCHSD1-205ENST00000520747 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
FCHSD1-205ENST00000520747 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
FCHSD1-205ENST00000520747 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
FCHSD1-205ENST00000520747 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 56 ms