RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 KRTAP19-5Q3LI72 72 aa5.52□□□□□ -1.53
CSMD1-207ENST00000520451 PRR15LQ9BU68 103 aa5.52□□□□□ -1.53
CSMD1-207ENST00000520451 A0A1B0GU69 56 aa5.51□□□□□ -1.53
CSMD1-207ENST00000520451 A6NED7 52 aa5.5□□□□□ -1.53
CSMD1-207ENST00000520451 MT1GP13640 62 aa5.49□□□□□ -1.53
CSMD1-207ENST00000520451 A0A1B0GU33 70 aa5.46□□□□□ -1.54
CSMD1-207ENST00000520451 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
CSMD1-207ENST00000520451 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
CSMD1-207ENST00000520451 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
CSMD1-207ENST00000520451 HMCN1Q96RW7 5635 aa5.42□□□□□ -1.54
CSMD1-207ENST00000520451 MT1MQ8N339 61 aa5.41□□□□□ -1.54
CSMD1-207ENST00000520451 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
CSMD1-207ENST00000520451 MT4P47944 62 aa5.39□□□□□ -1.55
CSMD1-207ENST00000520451 MT1LQ93083 61 aa5.39□□□□□ -1.55
CSMD1-207ENST00000520451 A8MU10 97 aa5.38□□□□□ -1.55
CSMD1-207ENST00000520451 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
CSMD1-207ENST00000520451 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
CSMD1-207ENST00000520451 UQCR11O14957 56 aa5.34□□□□□ -1.55
CSMD1-207ENST00000520451 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
CSMD1-207ENST00000520451 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
CSMD1-207ENST00000520451 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
CSMD1-207ENST00000520451 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
CSMD1-207ENST00000520451 AHNAK2Q8IVF2 5795 aa5.29□□□□□ -1.56
CSMD1-207ENST00000520451 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
CSMD1-207ENST00000520451 ROMO1P60602 79 aa5.27□□□□□ -1.57
CSMD1-207ENST00000520451 TNP1P09430 55 aa5.26□□□□□ -1.57
CSMD1-207ENST00000520451 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CSMD1-207ENST00000520451 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
CSMD1-207ENST00000520451 K7ERS5 55 aa5.13□□□□□ -1.59
CSMD1-207ENST00000520451 KRTAP4-7Q9BYR0 210 aa5.12□□□□□ -1.59
CSMD1-207ENST00000520451 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
CSMD1-207ENST00000520451 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
CSMD1-207ENST00000520451 LUZP6Q538Z0 58 aa5.02□□□□□ -1.61
CSMD1-207ENST00000520451 KRTAP5-3Q6L8H2 238 aa5□□□□□ -1.61
CSMD1-207ENST00000520451 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
CSMD1-207ENST00000520451 KRTAP5-7Q6L8G8 165 aa4.99□□□□□ -1.61
CSMD1-207ENST00000520451 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
CSMD1-207ENST00000520451 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
CSMD1-207ENST00000520451 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
CSMD1-207ENST00000520451 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
CSMD1-207ENST00000520451 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
CSMD1-207ENST00000520451 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
CSMD1-207ENST00000520451 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
CSMD1-207ENST00000520451 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
CSMD1-207ENST00000520451 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
CSMD1-207ENST00000520451 KRTAP4-11Q9BYQ6 195 aa4.6□□□□□ -1.67
CSMD1-207ENST00000520451 MT1AP04731 61 aa4.57□□□□□ -1.68
CSMD1-207ENST00000520451 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
CSMD1-207ENST00000520451 KRTAP5-2Q701N4 177 aa4.57□□□□□ -1.68
CSMD1-207ENST00000520451 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
CSMD1-207ENST00000520451 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
CSMD1-207ENST00000520451 KRTAP9-4Q9BYQ2 154 aa4.52□□□□□ -1.69
CSMD1-207ENST00000520451 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
CSMD1-207ENST00000520451 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
CSMD1-207ENST00000520451 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
CSMD1-207ENST00000520451 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
CSMD1-207ENST00000520451 MUC5BQ9HC84 5762 aaPredicted RBP4.39□□□□□ -1.71
CSMD1-207ENST00000520451 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
CSMD1-207ENST00000520451 OBSCNQ5VST9 7968 aa4.31□□□□□ -1.72
CSMD1-207ENST00000520451 INE1O15225 51 aa4.22□□□□□ -1.73
CSMD1-207ENST00000520451 MT3P25713 68 aa4.19□□□□□ -1.74
CSMD1-207ENST00000520451 KRTAP4-2Q9BYR5 136 aa4.16□□□□□ -1.74
CSMD1-207ENST00000520451 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
CSMD1-207ENST00000520451 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
CSMD1-207ENST00000520451 LCE1BQ5T7P3 118 aa3.71□□□□□ -1.82
CSMD1-207ENST00000520451 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
CSMD1-207ENST00000520451 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
CSMD1-207ENST00000520451 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
CSMD1-207ENST00000520451 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
CSMD1-207ENST00000520451 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
CSMD1-207ENST00000520451 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
CSMD1-207ENST00000520451 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
CSMD1-207ENST00000520451 KRTAP21-2Q3LI59 83 aa3□□□□□ -1.93
CSMD1-207ENST00000520451 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
CSMD1-207ENST00000520451 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
CSMD1-207ENST00000520451 PRM1P04553 51 aa2.52□□□□□ -2.01
CSMD1-207ENST00000520451 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
CSMD1-207ENST00000520451 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms