RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
CTNNA1-221ENST00000520339 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
CTNNA1-221ENST00000520339 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CTNNA1-221ENST00000520339 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
CTNNA1-221ENST00000520339 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
CTNNA1-221ENST00000520339 CRIPTQ9P021 101 aa4.04□□□□□ -1.76
CTNNA1-221ENST00000520339 KMT2DO14686 5537 aa4.04□□□□□ -1.76
CTNNA1-221ENST00000520339 MDN1Q9NU22 5596 aa4.02□□□□□ -1.77
CTNNA1-221ENST00000520339 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
CTNNA1-221ENST00000520339 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
CTNNA1-221ENST00000520339 H0YAA0 97 aa3.98□□□□□ -1.77
CTNNA1-221ENST00000520339 A0A1B0GU33 70 aa3.94□□□□□ -1.78
CTNNA1-221ENST00000520339 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
CTNNA1-221ENST00000520339 MT1XP80297 61 aa3.89□□□□□ -1.79
CTNNA1-221ENST00000520339 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
CTNNA1-221ENST00000520339 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
CTNNA1-221ENST00000520339 SPRR2FQ96RM1 72 aa3.86□□□□□ -1.79
CTNNA1-221ENST00000520339 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
CTNNA1-221ENST00000520339 SPRR2EP22531 72 aa3.84□□□□□ -1.79
CTNNA1-221ENST00000520339 SPRR2BP35325 72 aa3.84□□□□□ -1.79
CTNNA1-221ENST00000520339 SPRR2AP35326 72 aa3.84□□□□□ -1.79
CTNNA1-221ENST00000520339 KRTAP2-1Q9BYU5 128 aa3.83□□□□□ -1.8
CTNNA1-221ENST00000520339 KRTAP12-2P59991 146 aa3.82□□□□□ -1.8
CTNNA1-221ENST00000520339 M0QZ58 72 aa3.81□□□□□ -1.8
CTNNA1-221ENST00000520339 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
CTNNA1-221ENST00000520339 R4GN34 69 aa3.8□□□□□ -1.8
CTNNA1-221ENST00000520339 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
CTNNA1-221ENST00000520339 A0A0D9SG42 100 aa3.75□□□□□ -1.81
CTNNA1-221ENST00000520339 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
CTNNA1-221ENST00000520339 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
CTNNA1-221ENST00000520339 SPRR2DP22532 72 aa3.7□□□□□ -1.82
CTNNA1-221ENST00000520339 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
CTNNA1-221ENST00000520339 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
CTNNA1-221ENST00000520339 INE1O15225 51 aa3.61□□□□□ -1.83
CTNNA1-221ENST00000520339 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
CTNNA1-221ENST00000520339 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
CTNNA1-221ENST00000520339 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
CTNNA1-221ENST00000520339 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
CTNNA1-221ENST00000520339 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
CTNNA1-221ENST00000520339 MT1EP04732 61 aa3.46□□□□□ -1.86
CTNNA1-221ENST00000520339 KRTAP19-3Q7Z4W3 81 aa3.45□□□□□ -1.86
CTNNA1-221ENST00000520339 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
CTNNA1-221ENST00000520339 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
CTNNA1-221ENST00000520339 TNP1P09430 55 aa3.39□□□□□ -1.87
CTNNA1-221ENST00000520339 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
CTNNA1-221ENST00000520339 MT1GP13640 62 aa3.35□□□□□ -1.87
CTNNA1-221ENST00000520339 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
CTNNA1-221ENST00000520339 MT1MQ8N339 61 aa3.3□□□□□ -1.88
CTNNA1-221ENST00000520339 HMCN1Q96RW7 5635 aa3.29□□□□□ -1.88
CTNNA1-221ENST00000520339 MT1LQ93083 61 aa3.28□□□□□ -1.88
CTNNA1-221ENST00000520339 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
CTNNA1-221ENST00000520339 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
CTNNA1-221ENST00000520339 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
CTNNA1-221ENST00000520339 MT4P47944 62 aa3.25□□□□□ -1.89
CTNNA1-221ENST00000520339 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
CTNNA1-221ENST00000520339 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
CTNNA1-221ENST00000520339 KRTAP12-3P60328 96 aa3.1□□□□□ -1.91
CTNNA1-221ENST00000520339 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
CTNNA1-221ENST00000520339 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
CTNNA1-221ENST00000520339 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
CTNNA1-221ENST00000520339 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CTNNA1-221ENST00000520339 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CTNNA1-221ENST00000520339 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
CTNNA1-221ENST00000520339 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
CTNNA1-221ENST00000520339 MT1AP04731 61 aa2.79□□□□□ -1.96
CTNNA1-221ENST00000520339 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
CTNNA1-221ENST00000520339 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
CTNNA1-221ENST00000520339 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
CTNNA1-221ENST00000520339 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CTNNA1-221ENST00000520339 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
CTNNA1-221ENST00000520339 KRTAP5-8O75690 187 aa2.71□□□□□ -1.98
CTNNA1-221ENST00000520339 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
CTNNA1-221ENST00000520339 MUC19Q7Z5P9 8384 aa2.16□□□□□ -2.06
CTNNA1-221ENST00000520339 PRM1P04553 51 aa2.09□□□□□ -2.07
CTNNA1-221ENST00000520339 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
CTNNA1-221ENST00000520339 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
CTNNA1-221ENST00000520339 KRTAP21-1Q3LI58 79 aa1.51□□□□□ -2.17
CTNNA1-221ENST00000520339 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 121.6 ms