RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 KRTAP5-7Q6L8G8 165 aa6.81□□□□□ -1.32
HDAC2-207ENST00000520170 KRTAP5-3Q6L8H2 238 aa6.79□□□□□ -1.32
HDAC2-207ENST00000520170 TNP1P09430 55 aa6.78□□□□□ -1.32
HDAC2-207ENST00000520170 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
HDAC2-207ENST00000520170 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
HDAC2-207ENST00000520170 A8MU10 97 aa6.73□□□□□ -1.33
HDAC2-207ENST00000520170 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
HDAC2-207ENST00000520170 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
HDAC2-207ENST00000520170 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
HDAC2-207ENST00000520170 A0A1B0GU69 56 aa6.65□□□□□ -1.34
HDAC2-207ENST00000520170 KRTAP12-3P60328 96 aa6.61□□□□□ -1.35
HDAC2-207ENST00000520170 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
HDAC2-207ENST00000520170 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
HDAC2-207ENST00000520170 H7BZZ5 65 aa6.53□□□□□ -1.36
HDAC2-207ENST00000520170 KRTAP12-4P60329 112 aa6.53□□□□□ -1.36
HDAC2-207ENST00000520170 COX7CP15954 63 aa6.51□□□□□ -1.37
HDAC2-207ENST00000520170 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
HDAC2-207ENST00000520170 SYNE1Q8NF91 8797 aaKnown RBP6.34□□□□□ -1.39
HDAC2-207ENST00000520170 PRR15LQ9BU68 103 aa6.31□□□□□ -1.4
HDAC2-207ENST00000520170 KRTAP4-11Q9BYQ6 195 aa6.2□□□□□ -1.42
HDAC2-207ENST00000520170 KRTAP25-1Q3LHN0 102 aa6.17□□□□□ -1.42
HDAC2-207ENST00000520170 LINC01558Q9Y6Z2 57 aa6.14□□□□□ -1.43
HDAC2-207ENST00000520170 UQCR11O14957 56 aa6.08□□□□□ -1.44
HDAC2-207ENST00000520170 KRTAP5-2Q701N4 177 aa6.08□□□□□ -1.44
HDAC2-207ENST00000520170 ANAPC13Q9BS18 74 aa6.06□□□□□ -1.44
HDAC2-207ENST00000520170 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
HDAC2-207ENST00000520170 KRTAP15-1Q3LI76 137 aa6.04□□□□□ -1.44
HDAC2-207ENST00000520170 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
HDAC2-207ENST00000520170 MT1AP04731 61 aa6.01□□□□□ -1.45
HDAC2-207ENST00000520170 KRTAP5-8O75690 187 aa5.99□□□□□ -1.45
HDAC2-207ENST00000520170 ATP5EP56381 51 aaPredicted RBP5.99□□□□□ -1.45
HDAC2-207ENST00000520170 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
HDAC2-207ENST00000520170 CCDC179H3BU77 68 aa5.97□□□□□ -1.45
HDAC2-207ENST00000520170 MIR22HGQ0VDD5 57 aa5.92□□□□□ -1.46
HDAC2-207ENST00000520170 MUC5ACP98088 5654 aa5.89□□□□□ -1.47
HDAC2-207ENST00000520170 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
HDAC2-207ENST00000520170 K7ERS5 55 aa5.89□□□□□ -1.47
HDAC2-207ENST00000520170 AHNAKQ09666 5890 aaKnown RBP5.88□□□□□ -1.47
HDAC2-207ENST00000520170 MUC5BQ9HC84 5762 aaPredicted RBP5.85□□□□□ -1.47
HDAC2-207ENST00000520170 KRTAP6-2Q3LI66 62 aa5.84□□□□□ -1.47
HDAC2-207ENST00000520170 OBSCNQ5VST9 7968 aa5.83□□□□□ -1.48
HDAC2-207ENST00000520170 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
HDAC2-207ENST00000520170 TMEM258P61165 79 aa5.67□□□□□ -1.5
HDAC2-207ENST00000520170 PSPHP1O15172 72 aa5.6□□□□□ -1.51
HDAC2-207ENST00000520170 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
HDAC2-207ENST00000520170 KRTAP5-1Q6L8H4 278 aa5.54□□□□□ -1.52
HDAC2-207ENST00000520170 MT3P25713 68 aa5.52□□□□□ -1.53
HDAC2-207ENST00000520170 CDC42SE1Q9NRR8 79 aa5.52□□□□□ -1.53
HDAC2-207ENST00000520170 Q1T7F1 81 aa5.5□□□□□ -1.53
HDAC2-207ENST00000520170 V9GYY9 64 aa5.47□□□□□ -1.53
HDAC2-207ENST00000520170 ROMO1P60602 79 aa5.4□□□□□ -1.54
HDAC2-207ENST00000520170 A6NED7 52 aa5.37□□□□□ -1.55
HDAC2-207ENST00000520170 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
HDAC2-207ENST00000520170 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
HDAC2-207ENST00000520170 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
HDAC2-207ENST00000520170 LCE1CQ5T751 118 aa4.78□□□□□ -1.64
HDAC2-207ENST00000520170 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
HDAC2-207ENST00000520170 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
HDAC2-207ENST00000520170 PCP4P48539 62 aa4.3□□□□□ -1.72
HDAC2-207ENST00000520170 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
HDAC2-207ENST00000520170 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-207ENST00000520170 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
HDAC2-207ENST00000520170 PHGR1C9JFL3 82 aa4.14□□□□□ -1.75
HDAC2-207ENST00000520170 BRK1Q8WUW1 75 aa4.09□□□□□ -1.75
HDAC2-207ENST00000520170 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
HDAC2-207ENST00000520170 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
HDAC2-207ENST00000520170 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
HDAC2-207ENST00000520170 PMAIP1Q13794 54 aa3.8□□□□□ -1.8
HDAC2-207ENST00000520170 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
HDAC2-207ENST00000520170 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
HDAC2-207ENST00000520170 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
HDAC2-207ENST00000520170 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
HDAC2-207ENST00000520170 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
HDAC2-207ENST00000520170 KTN1-AS1Q86SY8 53 aa3.03□□□□□ -1.92
HDAC2-207ENST00000520170 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
HDAC2-207ENST00000520170 PRM1P04553 51 aa2.76□□□□□ -1.97
HDAC2-207ENST00000520170 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
HDAC2-207ENST00000520170 INE1O15225 51 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 71.5 ms