RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 RPS28P62857 69 aaKnown RBP6.74□□□□□ -1.33
SREK1-207ENST00000520058 A6NED7 52 aa6.72□□□□□ -1.33
SREK1-207ENST00000520058 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
SREK1-207ENST00000520058 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
SREK1-207ENST00000520058 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
SREK1-207ENST00000520058 MT1GP13640 62 aa6.66□□□□□ -1.34
SREK1-207ENST00000520058 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
SREK1-207ENST00000520058 MT1LQ93083 61 aa6.55□□□□□ -1.36
SREK1-207ENST00000520058 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
SREK1-207ENST00000520058 H3BS24 57 aa6.51□□□□□ -1.37
SREK1-207ENST00000520058 DSTQ03001 7570 aaKnown RBP6.49□□□□□ -1.37
SREK1-207ENST00000520058 MT1MQ8N339 61 aa6.48□□□□□ -1.37
SREK1-207ENST00000520058 CDC42SE1Q9NRR8 79 aa6.48□□□□□ -1.37
SREK1-207ENST00000520058 KRTAP23-1A1A580 65 aa6.42□□□□□ -1.38
SREK1-207ENST00000520058 ROMO1P60602 79 aa6.35□□□□□ -1.39
SREK1-207ENST00000520058 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
SREK1-207ENST00000520058 KRTAP9-9Q9BYP9 154 aa6.33□□□□□ -1.4
SREK1-207ENST00000520058 KRTAP9-4Q9BYQ2 154 aa6.33□□□□□ -1.4
SREK1-207ENST00000520058 KRTAP19-4Q3LI73 84 aa6.28□□□□□ -1.4
SREK1-207ENST00000520058 KRTAP4-3Q9BYR4 195 aa6.26□□□□□ -1.41
SREK1-207ENST00000520058 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
SREK1-207ENST00000520058 KRTAP4-9Q9BYQ8 210 aa6.19□□□□□ -1.42
SREK1-207ENST00000520058 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
SREK1-207ENST00000520058 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
SREK1-207ENST00000520058 LCE1DQ5T752 114 aa6.08□□□□□ -1.44
SREK1-207ENST00000520058 MT4P47944 62 aa6.07□□□□□ -1.44
SREK1-207ENST00000520058 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
SREK1-207ENST00000520058 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
SREK1-207ENST00000520058 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
SREK1-207ENST00000520058 KRTAP5-5Q701N2 237 aaPredicted RBP5.88□□□□□ -1.47
SREK1-207ENST00000520058 HMCN1Q96RW7 5635 aa5.88□□□□□ -1.47
SREK1-207ENST00000520058 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
SREK1-207ENST00000520058 GPR98Q8WXG9 6306 aa5.84□□□□□ -1.47
SREK1-207ENST00000520058 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
SREK1-207ENST00000520058 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
SREK1-207ENST00000520058 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
SREK1-207ENST00000520058 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
SREK1-207ENST00000520058 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
SREK1-207ENST00000520058 MT1AP04731 61 aa5.6□□□□□ -1.51
SREK1-207ENST00000520058 SYNE1Q8NF91 8797 aaKnown RBP5.55□□□□□ -1.52
SREK1-207ENST00000520058 AHNAK2Q8IVF2 5795 aa5.55□□□□□ -1.52
SREK1-207ENST00000520058 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
SREK1-207ENST00000520058 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
SREK1-207ENST00000520058 KRTAP5-3Q6L8H2 238 aa5.52□□□□□ -1.53
SREK1-207ENST00000520058 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
SREK1-207ENST00000520058 KRTAP5-7Q6L8G8 165 aa5.36□□□□□ -1.55
SREK1-207ENST00000520058 PRO0628Q9UI54 55 aa5.34□□□□□ -1.55
SREK1-207ENST00000520058 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
SREK1-207ENST00000520058 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
SREK1-207ENST00000520058 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
SREK1-207ENST00000520058 MT3P25713 68 aa5.16□□□□□ -1.58
SREK1-207ENST00000520058 KTN1-AS1Q86SY8 53 aa5.08□□□□□ -1.6
SREK1-207ENST00000520058 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
SREK1-207ENST00000520058 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
SREK1-207ENST00000520058 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
SREK1-207ENST00000520058 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
SREK1-207ENST00000520058 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
SREK1-207ENST00000520058 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
SREK1-207ENST00000520058 MUC5ACP98088 5654 aa4.55□□□□□ -1.68
SREK1-207ENST00000520058 MUC5BQ9HC84 5762 aaPredicted RBP4.54□□□□□ -1.68
SREK1-207ENST00000520058 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
SREK1-207ENST00000520058 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
SREK1-207ENST00000520058 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
SREK1-207ENST00000520058 LCE1CQ5T751 118 aa4.32□□□□□ -1.72
SREK1-207ENST00000520058 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
SREK1-207ENST00000520058 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
SREK1-207ENST00000520058 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
SREK1-207ENST00000520058 KRTAP5-11Q6L8G4 156 aa3.89□□□□□ -1.79
SREK1-207ENST00000520058 LCE1FQ5T754 118 aa3.79□□□□□ -1.8
SREK1-207ENST00000520058 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
SREK1-207ENST00000520058 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
SREK1-207ENST00000520058 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
SREK1-207ENST00000520058 PHGR1C9JFL3 82 aa3.35□□□□□ -1.87
SREK1-207ENST00000520058 PRM1P04553 51 aa3.23□□□□□ -1.89
SREK1-207ENST00000520058 INE1O15225 51 aa3.13□□□□□ -1.91
SREK1-207ENST00000520058 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
SREK1-207ENST00000520058 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
SREK1-207ENST00000520058 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms